| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6344 |
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| Symbol | |
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| ID | 7975666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 1078753 |
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| End bp | 1079685 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796912 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002948171 |
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| Protein GI | 239820986 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATCC GTCAGCTGCG CTATTTCGTC AAGGTCGTCG AGCTCAAGAA CATCACGACC
GCGGCGGAGG CGCTTTTCAT CGCCCAGCCT TCCTTGAGCC AGCACATGGC CAATCTGGAG
TCGGAGCTCG GCGTCACCTT GCTGGAACGC AGTGTTCACG GCACGCGGGC CACGGCCATC
GGCGAGCTGC TCTATCGCCA TGCGAAGACG ATCCTGCGGC AGTTCGAAGA CACCCGCTCG
GCCATCCGGC AGGAGAGCGA ATCGCCTTCG GGCCGGGTGG CCATCGGGTT CCCGACCAGC
ACCTCGCGCA TCCTGGCCGC GCCGCTGCTG GCGCGGCTGC AGGAGCGCTA TCCGCTGATC
GAACTGGAAA TGGTGGAGGC CTCCAGCGGG GACTTGACGG GGCAGGTGGC GGCCGACCGG
CTGGCGCTGG CGGTCACGAT GGATGCCCGG GCCGATTCGC GCCTGCGCAT CGAGCCGATC
CTGGAGGAAG AACTGTTCGT GGTGGTGGCC TCGTCGCAAA AAGCACCGCG CGCCTTCGGC
ATCGAGGCCT TTGCCAAGCT GCCGCTGCTG CTGCCCACGC ATCCGAATTC GGTGCGCGTG
GCCACCGAGC GGCTGCTGCG CGATCGCCAA CTGAAATTCC GCCTGGTGGC CGAAACCAGC
GCAGTGGAAA TCCTGATCCT GGCCGTCGAG CGCGGGCTCG GCGCCACGGT GCTGCCGACC
GCGGCCTTTG CGCTGGCGCA GCAGCATGGC CGCGTGCGCG GCGTTCCCAT CAAGGGACGG
CCGCTGCTGC GCGAGCTGTC GCTGAGCCTG TCGGCCCCGG CGGCGCACAG TCCCGCCGTG
CAATGCGTGC GCGAACTGCT GCTGCAGGTG ATCGACGAGG AGATCGCAAG CAAGCGCTGG
AAGGGCGTGC GGCGGTTCAG CGGCGCAGGG TAG
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| Protein sequence | MDIRQLRYFV KVVELKNITT AAEALFIAQP SLSQHMANLE SELGVTLLER SVHGTRATAI
GELLYRHAKT ILRQFEDTRS AIRQESESPS GRVAIGFPTS TSRILAAPLL ARLQERYPLI
ELEMVEASSG DLTGQVAADR LALAVTMDAR ADSRLRIEPI LEEELFVVVA SSQKAPRAFG
IEAFAKLPLL LPTHPNSVRV ATERLLRDRQ LKFRLVAETS AVEILILAVE RGLGATVLPT
AAFALAQQHG RVRGVPIKGR PLLRELSLSL SAPAAHSPAV QCVRELLLQV IDEEIASKRW
KGVRRFSGAG
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