| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6335 |
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| Symbol | |
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| ID | 7975657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 1070060 |
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| End bp | 1071430 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644796904 |
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| Product | Chloride channel core |
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| Protein accession | YP_002948163 |
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| Protein GI | 239820978 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0038] Chloride channel protein EriC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.333909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGCG AGCCAGACTT CCTCGAACAT CTGCGGACCG AACTCTCGAG CGGCCGCACC
TGGCTCGACC GCGCCATCGT GCTGGGCTAT GCGATTGCGG CCGGGCTCTT CGTGGTGGGC
TTCACGCTTG CGAGCGATTG GGTGTTCGGC GCGTTCCAGC GCTTCCACCG CGCGTGGCCC
TGGGCCGTGC TGCTGACCAC GCCGCTGCTC ACCGCCGCCA TCGCGTGGTT CACGCTGCGC
TTCTTCCCGG GCGCGGGAGG CTCGGGCATT CCGCAGATCA AGGCGGCGCT GCACGCCACG
CTGCCGGAGG AACGGCGCTT CAGCTTCGCA TCGCTGCGGC TCACGGTCGC CAAGATCGGG
CTCGGCGCGG CGGGCTTCGC GGCGGGGCTT TCGATCGGGC GCGAAGGGCC TTCGGTGCAG
GTGGCGGCCG GGGTGATGCA GCATGCGCGG CGCTGGCTGT CGCCGCGCAC CACCATCGAC
GGGCGCGCGC TGCTGGTGGC CGGCGGCGCG GCGGGCATCG CGGCCGCCTT CAATGCGCCG
CTCGCGGGCG TGGTGTTCGC GATCGAGGAG CTCTCGGGCC GCCTGGAGGC GCGTTCCAGC
GGCCTGATCA TCACCGCCAT CGTGCTGGCG GGCCTGGTGG CCGTCTCGGT GTTCGGCAAC
AGCAGCTATT TCGGCGTGAT CCGCGTGCCG CGGCTCGGGT GGGACGCGCT CGGGCCGGGC
CTCTTGGTCA CGCTGCTCAG CGGCGCGGCG GGCGGCCTGT TCGCACGCCT GCTGATCGCC
TCGCTCACGG GCGCGCCGGG GCGCCTCAAC CGCTGGCGCG CGCGCTTTCC GGTGCGCTTC
GCGGCTGCCT GCGGCCTGGC CGTGGCCATC ATCGGGCTCG TCACCGGCGG TGTCACCTTC
GGCGCCGGGT CGGAGGCCGT GAAGCAGATG CTGCAGGGGC ATGACGAACT CACGCCGCTC
AACACCGTGC TCAAGTTCGT CGCCACCTGG CTCACGGCCT GGAGCGGCGT GCCGGGCGGC
ATCTTCGCGC CTTCGCTGTC CATCGGCGCG GGCATCGGCG ACGCGGTGGC CGCGCTGGCC
AGCCGCGATC TCGGCCCTGC GCTGATCGCG ATGGGCATGG CCGGCTTCCT GGCTGCGGTC
ACTCAGGCGC CGCTCACCGC CTTCATCATC GTGATGGAAA TGGTCGATGG CCATTCGATG
GTGCTGAGCC TGATGGCGGC TGCCATGCTG TCCAGCCTGG TCTCGCGCAT GATCAGCCGG
CCGCTGTACG ACACGCTGGC CGAGCACATG GTGTGGCGCG CCGTGGGCTC GATGCAGCCC
ACGGATGCCG CGGCAGTCAC GCCCGCCGCC AGGACAACGC CGACGCCGTG A
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| Protein sequence | MNREPDFLEH LRTELSSGRT WLDRAIVLGY AIAAGLFVVG FTLASDWVFG AFQRFHRAWP
WAVLLTTPLL TAAIAWFTLR FFPGAGGSGI PQIKAALHAT LPEERRFSFA SLRLTVAKIG
LGAAGFAAGL SIGREGPSVQ VAAGVMQHAR RWLSPRTTID GRALLVAGGA AGIAAAFNAP
LAGVVFAIEE LSGRLEARSS GLIITAIVLA GLVAVSVFGN SSYFGVIRVP RLGWDALGPG
LLVTLLSGAA GGLFARLLIA SLTGAPGRLN RWRARFPVRF AAACGLAVAI IGLVTGGVTF
GAGSEAVKQM LQGHDELTPL NTVLKFVATW LTAWSGVPGG IFAPSLSIGA GIGDAVAALA
SRDLGPALIA MGMAGFLAAV TQAPLTAFII VMEMVDGHSM VLSLMAAAML SSLVSRMISR
PLYDTLAEHM VWRAVGSMQP TDAAAVTPAA RTTPTP
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