| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6325 |
|---|
| Symbol | |
|---|
| ID | 7975647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012792 |
|---|
| Strand | + |
|---|
| Start bp | 1063056 |
|---|
| End bp | 1063340 |
|---|
| Gene Length | 285 bp |
|---|
| Protein Length | 94 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644796894 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002948153 |
|---|
| Protein GI | 239820968 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.318358 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACC TGAACGCGCC CGAGAGCAGC AGCAACAGCC GCGCCGTCGA ACGCGCGCTG
GACGAAAGCA AGCAGGTGAA GAAAACGGTG GAGGAAGCCG CCGACGAGCT CGCTGTCGTT
CATGTGGTGC TGGACAAGGG CGTCTCCGAG GACGCGCGCA CCGACGACCT CGACCGCGCG
ATCGAGCAGA CCGACCAGAT CGAGAAGAAG CTGTCGAAGT CGGTCGATCT GCTGGAGAAA
GTCGCCGAGG CGCTGGAGAC CGAAAGCCAC AAGAAGGCCT CGTGA
|
|---|
| Protein sequence | MPDLNAPESS SNSRAVERAL DESKQVKKTV EEAADELAVV HVVLDKGVSE DARTDDLDRA
IEQTDQIEKK LSKSVDLLEK VAEALETESH KKAS
|
|---|
| |