| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6323 |
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| Symbol | |
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| ID | 7975645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 1060080 |
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| End bp | 1061657 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644796892 |
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| Product | anaerobic nitric oxide reductase transcription regulator |
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| Protein accession | YP_002948151 |
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| Protein GI | 239820966 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACAA ACAGTGTCAG TTCGACCACA AGCGAAGCGG CCGCGGCCAC TGAGGCGCAG
CGCTACCGCT CGCTCCTTGC CGCCGCCCGC GGCCTCGTGC GATGCGATGC CGCCGCGCTG
CTGCGGCTCG ACGGCGACGT GCTGCGGCCG CTGGCCGTGG ACGGCCTGAG CGACGAAACC
CTGGGGCGGC AGTTCCCCGT GGCCTCGCAC CCGCGCTTTG CCCGCCTGCT CGAGAGCGAG
CGGGGTCTGC GCTTCGCGCA CGACTGCGGC CTGCCCGACC CGTACGACGG CCTGGTCGCG
GGCCAGCCGG GCATCCTGCC CGTGCACGAC TGCATGGGCG CGCCGCTGCG CCTGCGCGGC
GCCACCTGGG GCCTCCTGAC GCTGGACGCG CTCGACGCCG GCACCTTCGA GGCCGTGGGC
CCGGCGCAGC TCGACGCGCT GGTGGCGCTG GTCGAGACCG GCATCGAGGC CGCCCACACG
ATCCAGGAGA TGGAAGCGCG CGCGATGCGC GAGCAGGCCG TCGCCCAGGC CCTGCGCTCG
GGCCGCGGCG CCACGCGCGA GCTCCTTGGC AGCAGCCCGG CAATGAAGCA GCTGTGCAGC
GAGATCGACA CGGTCGCGGT GTCCGACCTC ACGGTGCTGG TGCTCGGCGA GACCGGCGTG
GGCAAGGACC TGGTGGCGCA GCGCCTGCAT GCGCGCTCGC GCCGCAGCGA CCAGCCGCTG
GTGCAGGTGA ACTGCGCGGC GTTGCCCGAG ACGCTGGCCG ACAGCGAGCT CTTCGGCCAC
AAGCGCGGCG CCTTCACCGG CGCGGTGCAG GACCGCAACG GCAAGTTCGA GATCGCCGAT
GGCGGCACGC TCTTTCTCGA CGAGGTGGGG GAGCTGCCGC TGACGGTGCA GGCCAAGCTG
CTGCGCGTGC TGCAAAGCGG CGAGCTGCAG CGGCCCGGCA GCGATCGCAC GCTGAAGGTC
GACGTGCGCG TGATCGCGGC CACCAACCGC GACTTGCCTG CGGCGATCGC GCAGGGGCGC
TTCCGGGCCG ATCTCTACCA CCGGCTCTCG GTCTATCCGC TGGTCGTGCC GCCGCTGCGC
GAGCGCGGCC GCGACGTGGT GGCGCTTGCG GGCGGCTTCC TTGAAGAGAA CCAGCATCGC
CTGGGCGCGC GCAACCTGCG GCTGTCGCCG GCCGCCAAGG CCGCCCTGCT CGCGCACGGC
TGGCCCGGCA ACGTGCGCGA GCTGGAGCAT GTGATCAGCC GCGCGTCGCT GCGCGCCTTC
AGGGAGCAGC GCCGCGGCGC GCGCTGGACG GCGATCGAGC CGCATCACCT GGCGCTGGAG
GCTGCGGCGG CCGGCGGTCC GGCAGCGTCG CCTGCGCCAC CTGCACCGGC GCCGGCAGGC
CAGCACGCGG GCGTTGCCAG TGGCGGCGCC ACGCTGCGCG AAGCCACCGA GGCCTTCCAG
CGCGCCTGGC TCGCCGATGC GCTGGCGCGG CACCGCGGGC ACGTGGCCAA TGCGGCGCGC
GAGGCCGGCA TCGACCGCAG CAATTTCCAC CGGACGCTGC GCAAGCTGGG CGTGCCGCGG
CCGGAAAGCA CGCCCTGA
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| Protein sequence | MTTNSVSSTT SEAAAATEAQ RYRSLLAAAR GLVRCDAAAL LRLDGDVLRP LAVDGLSDET
LGRQFPVASH PRFARLLESE RGLRFAHDCG LPDPYDGLVA GQPGILPVHD CMGAPLRLRG
ATWGLLTLDA LDAGTFEAVG PAQLDALVAL VETGIEAAHT IQEMEARAMR EQAVAQALRS
GRGATRELLG SSPAMKQLCS EIDTVAVSDL TVLVLGETGV GKDLVAQRLH ARSRRSDQPL
VQVNCAALPE TLADSELFGH KRGAFTGAVQ DRNGKFEIAD GGTLFLDEVG ELPLTVQAKL
LRVLQSGELQ RPGSDRTLKV DVRVIAATNR DLPAAIAQGR FRADLYHRLS VYPLVVPPLR
ERGRDVVALA GGFLEENQHR LGARNLRLSP AAKAALLAHG WPGNVRELEH VISRASLRAF
REQRRGARWT AIEPHHLALE AAAAGGPAAS PAPPAPAPAG QHAGVASGGA TLREATEAFQ
RAWLADALAR HRGHVANAAR EAGIDRSNFH RTLRKLGVPR PESTP
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