| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6321 |
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| Symbol | |
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| ID | 7975643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 1057281 |
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| End bp | 1059551 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796891 |
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| Product | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding |
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| Protein accession | YP_002948150 |
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| Protein GI | 239820965 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCCCA CTCACATCGA TTCCACCGAA CTGCCGCGCA TCCTTCAGCG CCTGATGGCC
GCCAGCCAAT CACAACCCGA GGACACCACC GCGCTGCCGC GCCGCAGCTT CCTCAAGCTG
GCCGGCGCCG GCGGCCTCGC CCTCGGCGCC TTTCCCCACA TGGCCATGGC GCAGGCCACC
GGCAAGCAAG CGGCGGCCAG CACCCTCAAG CCGACGCAGC AGCCCTCGGC CTTCGTGCAG
ATCGCGCCCA ACGGCGAAGT CACCATCACT CATAACCGCC TCGAATTCGG CCAGGGGGTG
CAGACCGGCC TGCCGATGAT CCTGGCCGAG GAGCTCGATG CCGACTGGAG CCTGGTGCGC
AGCAAGAGCG GCACCAACGA CGCCGCCTAC CACGACCCGG TCTTCGGCAT GCACCTGACC
GGCGGCTCCA ACTCGATCAA GAACAGCTTC ACGCAGTACC GCGAGCTCGG CGCGCGCGCC
CGCGCCATGC TGCTGTCGGC CGCCGCGGCG CGCTGGAACG TCGACGTATC CACGCTGCGC
ACGCAGGCCG GCACCGTGCT GGGCCCGAAC GGCCGCAAGC TGGGCTACGG CGAACTGGCC
GAGGCCGCCA TGGCGCTGCC AGTGCCCGAG AAGGTCAGCC TGAAGGACCC CAAGGACTTC
AAGCTCATCG GCCATCCGAC CACGCGGCTG GATGCGCGCG CCAAGAGCAG CGGCCGGCAG
GACTACGGCA TCGACGTCAA GCATGCGGGC CAGCTCACGG CCGTGGTGGC GCATCCGCCG
GTGTTCGGCG CGCGCCTGGC TTCGGTGGAC GATAGCGCCG CGCGCGCCGT CAAGGGCGTG
AAGGCCGTGC TGCGCGTGCC GCTGGACCGC GGCGCCGAGG GCGTGGCCGT GGTGGCCGAC
GGCTACTGGC CGGCCAAGCT GGGCCGCGAT GCGCTCAAGC TGCAGTGGGA CACGGCCGCC
GTCGAGAAGG TCGACAGCGA GAAGCAGTTG GTCCAGTACC GCGAACTGGC CAAGCAGCCC
GGCGCGCGCA AGTTCGACGC CGACATGGCG CCGCTGGCCA AGGCGCCGCG GCAGCTGGAA
GCCGAGTTCG TGTTCCCCTA CCTCGCCCAT GCGCCGATGG AGCCGCTGAA CTGCACCGTC
AAGCTGTCGG GCGACAGCGC CGAGCTGTGG GTCGGCACCC AGTGCGCGGG GCTCGACGGT
GCCGCGGCGG CGCGCGCGCT CGGCCTCAAG CCCGAGCAGG TGTGCGTGAA CGTGCAGATG
GCGGGCGGCG GCTTCGGCCG GCGCTTCGTG AGCACCAGCG ACGTGATCGT GGAGGCCTGC
GAGATCGCCA AGGCCGCGCG CGCCGCCGGG CTCAACGCGC CGGTGCGCCT GCTGTGGAGC
CGCGAGGACG ACATCAAGGG CGGCTACTAC CGCCCCATGC ACCTGCACCG CGCGCGCATC
GGCTTCGACG AGCGCGGCAA GGTGCTGGCC TGGGACCACG TCATCGTGGG CCAGTCGATC
ACCGCCGGTT CCGTGTTCGA GCCCTTCCAG GTGAAGAACG GCATCGATGC CACGGCCACC
GAGGGCATGC GCGATCCGTA TCCGCTGCCG ATGCGCCTGA CCGTGCACCA CCCCAAGGTC
AACGTGCCGG TGCTCTGGTG GCGCAGCGTG GGCTCCACCC ACACCGCCTT CGTGATGGAG
ACCCTGCTCG ACGAGATCGC GCGCAGCACA AAGCAGGACC CGGTGGCCTA CCGCATGCAG
CTCTTCGGCG ACAAGCACCC GCGCCACCGT GCCGCGCTGC AGCTCGCCGT CGACCGCAGC
GGCTATGGCA AGAAGCAGCT GCCCGCCGGC CGCGCCTGGG GCGTGGCGGT GCACGAGTCC
TTCGAGTCCG TGGTGGCCTA TGTGGTGGAG GCCTCGGTGA CGGACGGCCA GCCGGTGCTG
CACCGCGCCA CCGCCGGCGT GCACTGCAAC CTGGCCGTCA ACCCGCGCAG CGTGGAAGCG
CAGGTGCAGG GCGCCGCGGT CATGGGCCTG TCGATGTGCC TGCCGGGCGG CGCCATCACG
CTCAAGGACG GCGAAGTGCA GCAGGGCAAC TTCGGCGACT TCACCGTGCC GCGCATCACC
GACATGCCCG AGTTCGCCGT GCACATCGTG CCGAGCGCAC AGCCGCCCAA GGGCATCGGC
GAGCCGGGCC TGCCGCCGCT GGCGCCGGCT TTTGCGAACG CGATCGCGCA ACTGACGGGC
AAGCCGCTGC GGCAGCTGCC GTTCGACCTG GCTGACACGA AACCGGCATG A
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| Protein sequence | MLPTHIDSTE LPRILQRLMA ASQSQPEDTT ALPRRSFLKL AGAGGLALGA FPHMAMAQAT
GKQAAASTLK PTQQPSAFVQ IAPNGEVTIT HNRLEFGQGV QTGLPMILAE ELDADWSLVR
SKSGTNDAAY HDPVFGMHLT GGSNSIKNSF TQYRELGARA RAMLLSAAAA RWNVDVSTLR
TQAGTVLGPN GRKLGYGELA EAAMALPVPE KVSLKDPKDF KLIGHPTTRL DARAKSSGRQ
DYGIDVKHAG QLTAVVAHPP VFGARLASVD DSAARAVKGV KAVLRVPLDR GAEGVAVVAD
GYWPAKLGRD ALKLQWDTAA VEKVDSEKQL VQYRELAKQP GARKFDADMA PLAKAPRQLE
AEFVFPYLAH APMEPLNCTV KLSGDSAELW VGTQCAGLDG AAAARALGLK PEQVCVNVQM
AGGGFGRRFV STSDVIVEAC EIAKAARAAG LNAPVRLLWS REDDIKGGYY RPMHLHRARI
GFDERGKVLA WDHVIVGQSI TAGSVFEPFQ VKNGIDATAT EGMRDPYPLP MRLTVHHPKV
NVPVLWWRSV GSTHTAFVME TLLDEIARST KQDPVAYRMQ LFGDKHPRHR AALQLAVDRS
GYGKKQLPAG RAWGVAVHES FESVVAYVVE ASVTDGQPVL HRATAGVHCN LAVNPRSVEA
QVQGAAVMGL SMCLPGGAIT LKDGEVQQGN FGDFTVPRIT DMPEFAVHIV PSAQPPKGIG
EPGLPPLAPA FANAIAQLTG KPLRQLPFDL ADTKPA
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