| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6311 |
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| Symbol | |
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| ID | 7975633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 1049169 |
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| End bp | 1050410 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796881 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002948140 |
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| Protein GI | 239820955 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0278735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACTG CTGCCTCAGC GCGTCCGGCC GACGCGCTCG ACTCCAACTG GTCCCTCGTG
GCCGCCGGCG CGCTGATGAC CTGCGTGGCC ATCGGCGTGC TGTTTTCGCT GGCCGTTTTC
TTGGAGCCCA TGAGCGCGGC CACCGGCTGG TCGCGCGCGG GCATTTCCAG CGCCATGACG
CTGGCCTTCC TGAGCATGGG CGTGGCCGGC TTCGGCTGGG GCGCCTTGAG CGACCGCTAC
GGCCCGCGCG TGGTGGTGCT CGCGGGCACG GTGCTGCTCG GGCTTTCGAC GGTGCTGGCC
AGCCGCGCAT CGACCCTGCT CGAATTCCAG CTCTTCTACG GCGTGATGAT GGGCCTTGCG
GCCGGCAGCT TCTTCGCGCC GGTGATCGCC ACTGCCGCGT CGTGGTTCGA CAGGCACCGC
AGCCTGGCCG TCTCGCTGGT GTCGGCTGGC ATGGGCGTGG CGCCCATGAC CATCTCGCCG
CTGGCCGCAT GGCTGGTCAC GCATTACGAC TGGCGCACCG CCCAGCTGAT CATCGGCATC
GGCGCGTGGG TCGTGCTGCT GCCCGCGGTC TGGCTCATTC GCGCGGCGCC GCGCACCGCC
CACGCCGCTC CCGGAGGCGC AGCGCCAGCG CCGGAAATGA AGATCGGACA GGCGCTGCGC
TCGCGCGCCT TCCTGGTGCT CGGCATCACG TTCTTCGCCT GCTGCGCGGC CCACTCGGGC
CCGATCTTCC ACACGGTCAG CTATGCCATC GGCTGCGGCC TGCCGACCTT CGCGGCCGTC
ACCATCTACA GCATGGAAGG GGCGGCGGGC CTCGGCGGGC GGCTGCTCTT CGGCGTGCTG
GCGGACCGGC TGGGCGCCAA GCGGGTGCTC GTGGGCGGCC TGCTGATCCA GGCCTTTGCC
GCCGCGAGCT ACCTGCTGGT GAACCGTCTC GGCGGCTTCT ATGCCGTGGC CATCGTCTTC
GGCCTCGCCT ATGGCGGCGT GATGCCGCTC TATGCGGTGC TGGCGCGGGA CTACTTCGGT
CCCCGCATCC TCGGCACGGT GCTGGGTGCG GCGTCGATGC TGTCCAGCCT GGGCATGGCG
CTCGGCCCGG TGCTCGGCGG CTGGCTGTTC GACCGCTACG GCAGCTATGC CTGGATGTAC
ATCGGCTCGA TGGCCGTGGG GCTTGGCGCC GTGGCCATCG CGCTCACCTT CCCGCGGACC
GGTGCTGCCG GCAAGGCGCC GCGGCTACAG CCGGCGGGCT GA
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| Protein sequence | MNTAASARPA DALDSNWSLV AAGALMTCVA IGVLFSLAVF LEPMSAATGW SRAGISSAMT
LAFLSMGVAG FGWGALSDRY GPRVVVLAGT VLLGLSTVLA SRASTLLEFQ LFYGVMMGLA
AGSFFAPVIA TAASWFDRHR SLAVSLVSAG MGVAPMTISP LAAWLVTHYD WRTAQLIIGI
GAWVVLLPAV WLIRAAPRTA HAAPGGAAPA PEMKIGQALR SRAFLVLGIT FFACCAAHSG
PIFHTVSYAI GCGLPTFAAV TIYSMEGAAG LGGRLLFGVL ADRLGAKRVL VGGLLIQAFA
AASYLLVNRL GGFYAVAIVF GLAYGGVMPL YAVLARDYFG PRILGTVLGA ASMLSSLGMA
LGPVLGGWLF DRYGSYAWMY IGSMAVGLGA VAIALTFPRT GAAGKAPRLQ PAG
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