| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6305 |
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| Symbol | |
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| ID | 7975627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 1043872 |
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| End bp | 1044714 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644796875 |
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| Product | hypothetical protein |
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| Protein accession | YP_002948134 |
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| Protein GI | 239820949 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3220] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.380484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGACA CCCTCGCGGC CGGCCTCGGC CTCAAGCCGG AGCACTACGA GGCCGCGCTC
GGCGCGCGTG CCGAGGGCCT GTGGTTCGAG GTGCACCCCG AGAACTACAT GGTGGCGGGC
GGCCCGCGCA TCGGATGGCT CGAAGCGATC CGCGCGCGCC ATCCGGTGTC GCTGCATGGC
GTCTCGCTCT CGCTCGCAGG CGAGGCCGAG CCCGATGCAG CGCATCTCCA GCGGCTGGCG
GCGCTCGCCC GGCGCATCCA GCCTGCGCTG ATCTCCGAGC ACCTCGCGTG GTCCACATGG
AACGGCCAGT ACTTTCCGGA CCTGCTGCCT TTTCCGCGCA GCACCGCCGC GCTGCATCGC
ATCGCCGGCA ACATCGCGCG CACGCAGGAC GCGCTGGGCA TGGCGATGGC CATCGAGAAC
CCGTCCCACT ACCTGCACAT CGACGGGCAT GAATGGGACG AGATCGATTT TCTTGCCGAG
CTGTCACGCC GCACCGGCTG CAGGCTGCTG CTCGACATCA ACAACGTGTA CGTCTCCGCA
TGCAACCTGG GCTTCTCGGC CGCGGACTGG ATCGACCGCT TTCCGCAGGC GCTGGTCGGC
GAGATCCACC TTGCGGGCCA CAGCGCCGAC CCCACCCTCG GCGATGCACT GCTGATCGAT
TCGCACGATG CGCCCATCGC ACCGGAGGTC TGGCAGCTGT ACCGGCGCTT CGTCGATCGC
GCCGGCGTCC GGCCCACGCT GATCGAGCGC GACGGCAACG TGCCGGCCTT CGGGGAGCTC
ATGGCCGAGC AGCAACAGGC CGCGGCCGTG CTGCAGCGTG CCGCGCAGGA GGCCATCGCA
TGA
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| Protein sequence | MSDTLAAGLG LKPEHYEAAL GARAEGLWFE VHPENYMVAG GPRIGWLEAI RARHPVSLHG
VSLSLAGEAE PDAAHLQRLA ALARRIQPAL ISEHLAWSTW NGQYFPDLLP FPRSTAALHR
IAGNIARTQD ALGMAMAIEN PSHYLHIDGH EWDEIDFLAE LSRRTGCRLL LDINNVYVSA
CNLGFSAADW IDRFPQALVG EIHLAGHSAD PTLGDALLID SHDAPIAPEV WQLYRRFVDR
AGVRPTLIER DGNVPAFGEL MAEQQQAAAV LQRAAQEAIA
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