| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6303 |
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| Symbol | |
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| ID | 7975625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 1042275 |
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| End bp | 1043408 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796873 |
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| Product | glucose sorbosone dehydrogenase |
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| Protein accession | YP_002948132 |
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| Protein GI | 239820947 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCTGGC ATACCGGTGC GCGGGCGATG CCTGCGGACT CCGCGCCGGA TGCGCCGCAG
GCGAGCACCT TTGCCGACGG GCTGGAGTCG CCCTGGGGCA TGGATTTCAT GCCCGATGGC
CATCTGCTCG TCACCGAGCG CCCGGGCAGG CTGCGCATGA TCAGCGCCGA TGGGCGCGAG
ATCTCTTCCA TCGAAGGCGT TCCGCGCGTG GACCATCGCG ATCACGGGGG CCTGCTGGAC
GTCGCCATCG ATCCGGCCTT TGCCTCGAAT CGCCTCGTGT ACCTGAGCTA CACCAAAGCC
GGCCGCGGGC TGCACGCCGA CCGCAACGGC CTGGCGGTGG CACGCGCCCG CCTGAGCGAC
GACGGATCGC GCATCGATGA ACTCAAGGTG CTGTTTCGCC AGACGCCGGG CGCGGTGAAC
GGGCAGAACC TCGGCGGGCG GCTCGCGCTT TCCGCCGACG GCCATCTCTT CGTCACCATC
GGCGACCGCC ATGCGCCACT GGACCGCATG CGCGCCCAGG CGCTCGCCTA CTACCAGGGC
AAGACCGTGC GCATCCGCAC CGATGGCACC GTGCCCGACG ACAACCCCTT CGTCGCACGC
CAGGGCGCGC GCCCGGAAAT ATGGAGCCGC GGGCATCGCA ATCCGCAGGG CGCATTCGTC
CATCCCCGGA CCGGGCAGCT CTGGGTTGCC GAGCACGGGC CGCAGGGCGG CGACGAGATC
AACATCGTGC GCAAGGGCCT GAACTACGGC TGGCCGGTGG TGACCTTCGG CTGCGAGTAC
GACACCTGCG CGAAGATCGG CGAGGGAACA TCGAAGCGCG GCATGGAAGC GCCGCTGGCC
TTCTGGACAA CGCCGAAGAT CGCACCGAGC AACCTCATCC TCTACACCGG CGACCAGTTC
CCCGCGTGGA AGGGAAACGT CTTCGTCGGC ACATTGGCCG GCAAGGCCGT ATGGCGATTC
GAGCTCGCGG GCGAGGACAG CGCACCGCGC GTGGTTCGGC GCGAAGCCCT GTTCTCCGAA
CTGGGCGAGC GCATCCGCAA CTTGAGGCAA GGGCCCGATG GCAGCCTCTA CCTGCTCACG
GATGGTGCCA AGGCGCGCAT CGTGCGCGTG GCGCGGGCAG ACTCGATGCT GTAG
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| Protein sequence | MLWHTGARAM PADSAPDAPQ ASTFADGLES PWGMDFMPDG HLLVTERPGR LRMISADGRE
ISSIEGVPRV DHRDHGGLLD VAIDPAFASN RLVYLSYTKA GRGLHADRNG LAVARARLSD
DGSRIDELKV LFRQTPGAVN GQNLGGRLAL SADGHLFVTI GDRHAPLDRM RAQALAYYQG
KTVRIRTDGT VPDDNPFVAR QGARPEIWSR GHRNPQGAFV HPRTGQLWVA EHGPQGGDEI
NIVRKGLNYG WPVVTFGCEY DTCAKIGEGT SKRGMEAPLA FWTTPKIAPS NLILYTGDQF
PAWKGNVFVG TLAGKAVWRF ELAGEDSAPR VVRREALFSE LGERIRNLRQ GPDGSLYLLT
DGAKARIVRV ARADSML
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