| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6293 |
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| Symbol | |
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| ID | 7975509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 1030645 |
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| End bp | 1031091 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644796863 |
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| Product | protein of unknown function DUF1452 |
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| Protein accession | YP_002948122 |
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| Protein GI | 239820937 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5478] Predicted small integral membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.298566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAGT TCTTCGCATC CTTCGCCAAT GCCACGGCGC GCGCGGCCGG CAGTCCGATT
GCATTCCTGA TCTGTGTCGC GCTGGTCGTT GCCTGGGCGG CGGCGGGGCC CTTCTTCCAT
TTTTCCGAGA ACTGGCAGCT GACCATCAAC ACCGGCACCA CCATCGTCAC CTTCCTGATG
GTGTTCCTGA TCCAGAACAC GCAGAACCGC GACGGGGCGG CACTTCAGAC CAAGCTCGAC
GAGCTGATCC GGTCATCGAA CGCCGGCGAC GAGTTCATGG GCATCGAGAA GCTCACTGAC
AAGGAGCTGG CCGAGCTGCA CGAGAAATGC GAAGCGGCTG CCAAGAGAAG CCATGCCGCG
CTCGACCGCA CGCGCAGCGA GCGCGCACGG CGCGGCCACA GGGGCGCCCC CCAGGAAGGC
GCTCAACCAA CAGAAAGCAA AGCATGA
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| Protein sequence | MDKFFASFAN ATARAAGSPI AFLICVALVV AWAAAGPFFH FSENWQLTIN TGTTIVTFLM
VFLIQNTQNR DGAALQTKLD ELIRSSNAGD EFMGIEKLTD KELAELHEKC EAAAKRSHAA
LDRTRSERAR RGHRGAPQEG AQPTESKA
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