| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6285 |
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| Symbol | |
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| ID | 7975501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 1022737 |
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| End bp | 1023813 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796855 |
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| Product | cytidyltransferase-related domain protein |
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| Protein accession | YP_002948114 |
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| Protein GI | 239820929 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1056] Nicotinamide mononucleotide adenylyltransferase |
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| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000881728 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAGCA CGAACAAGGC GCCCGATGTC GCCGTCTACA TCGGACGCTT CCAGATCTTC
CACAACGCCC AGCTCGCGCT GCTGCACCGC GCGCTCGCCG CCGCGCCCGA GTGCGTGGTG
GTGCTCGGCT CGGCCTTCCA GGCGCGCACG CCGCGCAATC CCTTCACCTG GCAGGAGCGC
GCCGAGATGA TCCGCGTCGC GCTGCCGGAA GCGGAGCGCC AGCGGCTGAA GTTCCTGCCC
GTGCGCGACC ATTACAACCC CGCGCAATGG GTCGCGGCGG TGAAGCAGGG CCTGGCCCGG
CTGCATCCCG GCCAGCCGTC GGTGGTGCTG GTCGGGCACC TGAAGGACGC GACGAGCAGC
TACCTGCGCG ACTTTCCCGG CTGGGCGCTC GACGACGCCG GGCGCCGCGG CGACATCCAT
GCGAGCGCGC TGCGCGACGC GTATTTCGGG GCGGCCCACG ATGGTTCTCT GGAACCGGCC
TTGGCAGCCC TCGCAGGCCA GGCGCCGGAG AGCACGCTGC AGTTCCTGCG CGCCTGGGCC
AGCCTGCCGC CTTACGCGGT GCTGGCGCAG GAATGGGAGA GCCTGCGCCG CGAGAAGGCG
CTGTGGTCCG GCTCGCCGTA TTCGCCGGTC TTCGTCACGG TCGATGCGGT CGTCCAATGC
GGGCGCCAGG TGCTGCTGAT CCGGCGCGGC CGCTCGCCCG GCAAGGGCCT GTTGGGGGTG
CCGGGCGGTT TTCTCGAGCC GCGCGAGACC GTGTGGCAGT CGGCCTTGCG CGAGCTGGAA
GAGGAAACCG GCCTGCGCCT TCTGGACAGC GACATCGAAG CCGCCTTCAA GGCGGTGCAG
GTGTTCGACC ACCCCGACCG CAGCCAGCGC GGCCGCGTCA TCACCCACGC GCACTGGTTC
GACCTGGGCC CGCGCCGCCC GCCCGAACTG ACCGCCGGCG ACGACGCCTC GGAAGCCCGC
TGGGTGCCAA TCGACCAGCT GGCCGGCATG GAGGACCAGT TCCATGACGA CCACTTCCAC
ATCCTCGATT TCTTCTTCGG GTTGACCGCG GACAACGCGC AGGGCGGTAC CGCATGA
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| Protein sequence | MTSTNKAPDV AVYIGRFQIF HNAQLALLHR ALAAAPECVV VLGSAFQART PRNPFTWQER
AEMIRVALPE AERQRLKFLP VRDHYNPAQW VAAVKQGLAR LHPGQPSVVL VGHLKDATSS
YLRDFPGWAL DDAGRRGDIH ASALRDAYFG AAHDGSLEPA LAALAGQAPE STLQFLRAWA
SLPPYAVLAQ EWESLRREKA LWSGSPYSPV FVTVDAVVQC GRQVLLIRRG RSPGKGLLGV
PGGFLEPRET VWQSALRELE EETGLRLLDS DIEAAFKAVQ VFDHPDRSQR GRVITHAHWF
DLGPRRPPEL TAGDDASEAR WVPIDQLAGM EDQFHDDHFH ILDFFFGLTA DNAQGGTA
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