| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6277 |
|---|
| Symbol | |
|---|
| ID | 7975493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012792 |
|---|
| Strand | - |
|---|
| Start bp | 1014773 |
|---|
| End bp | 1015066 |
|---|
| Gene Length | 294 bp |
|---|
| Protein Length | 97 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644796847 |
|---|
| Product | Antibiotic biosynthesis monooxygenase |
|---|
| Protein accession | YP_002948106 |
|---|
| Protein GI | 239820921 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1359] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000255974 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCACG CACTGCTCGT CGACTTCCAG ATCCACCCCG AGCGAGCCGA AGCCTTTGCC
GAAGCCATCG CACACAATGC GCAGCGTTCG CTCGGCGACG AGCCGGGTTG CAGCCGCTTC
GATGTATGCC GCGACCCGGC CGACCCTGGC GCCTTCTTCC TCTACGAGCT GTACGACGAT
CCAGCGGCCA TCGAGACCCA CCTGGCTGCG CCGCACTTCC TTGCGTTCGA CGCGATGACG
CGCGACTGGG TCGTGCGCAA GTCGGTGCGA ACCCGCGTGC TGGTGGGTAC GTAA
|
|---|
| Protein sequence | MTHALLVDFQ IHPERAEAFA EAIAHNAQRS LGDEPGCSRF DVCRDPADPG AFFLYELYDD
PAAIETHLAA PHFLAFDAMT RDWVVRKSVR TRVLVGT
|
|---|
| |