| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6269 |
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| Symbol | |
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| ID | 7975485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 1008017 |
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| End bp | 1009054 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796839 |
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| Product | oxidoreductase domain protein |
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| Protein accession | YP_002948098 |
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| Protein GI | 239820913 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAGC CCTTGCGCGT GGGCCTGGTC GGCGCAGGTT GGGTCAGCTC GCACCATCTT
GCGGGTTGGC GGGCGCTCGA AGGGCAGGCC GTGGTCGTGG CCATCGCCGA CCCGAACATC
GCCAACGCCG AGGCGCGTGC ACGCGAGTTC GGCATCGCCC GGGTCTTTGC GAGCGCGCAG
GAGATGCTTG ACGCAATGCC GCTTGATGCG GTCGACGTGG CGGCGCCGCG CGAATTCCAT
GCGGCCATCG TGCGCGCCGC GGCAGAGCGT GGCCTGGCCG TGCTGTGCCA GAAGCCCCTG
GCTCCCACGC TCGCCGAAGC CCGTGCACTG GCCGACGAAG TGGCGCCCAG GTGCCGGCTC
ATGGTCCACG AGAACTGGCG CTTCCGTCGC TGCTACCGCG ACCTCGCGGG ATGGCTCGCG
GAGGGCCGCA TCGGCGACGT GGTCCAGGCG AGCATGACCT TGATGACCTC CGGCCTGCTG
CCCGGCGAGG CCGGCAGGCT GCCTGCGCTC GAGCGCCAGC CCTTCATCGC GGGTCTGGAG
CGCGCACTGG TGATGGAGAT ACTGATCCAC CACATCGACA CGTTGCGCTT TCTGCTGGGC
GAACTGACGC TGGTGCATGC GCGGCTCGGG CGCGCGAGCC CGGTGATGCG CGGCGAGGAC
CGGGCCTTCC TGTCCTTCGA GACCACGTTG CAGGCCCCGG TGGCGCTGCT GGCCAACCTG
TCGGTGCACG GCCGCGCGCC GGCCCAGGCC GACCGGCTGA CCCTGGTCGG CACCAAGGGG
ACCATCGAGC TCGAGGACGA CACGCTGCGC TGCCTGGGTG CGCAGCCTGC TGAGCTGCGC
TACGACCTGC CCGCGTGCTA TCTCGCCTCC TACGCGGCAA CGATCGCGCA TTTTGTCGAC
AGCGTACGCA ATGGCCGCGC CTTCGAGACC GAGCCGGCCG ACAACCTGCG CACGCTGGCG
CTGGTCGAGG CGGTGTATCG GCAAGGGGAA ACTGCGAGCG AAGCCTTCCT GGAACGGACG
CCGCGGATCG GGGCCTGA
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| Protein sequence | MTKPLRVGLV GAGWVSSHHL AGWRALEGQA VVVAIADPNI ANAEARAREF GIARVFASAQ
EMLDAMPLDA VDVAAPREFH AAIVRAAAER GLAVLCQKPL APTLAEARAL ADEVAPRCRL
MVHENWRFRR CYRDLAGWLA EGRIGDVVQA SMTLMTSGLL PGEAGRLPAL ERQPFIAGLE
RALVMEILIH HIDTLRFLLG ELTLVHARLG RASPVMRGED RAFLSFETTL QAPVALLANL
SVHGRAPAQA DRLTLVGTKG TIELEDDTLR CLGAQPAELR YDLPACYLAS YAATIAHFVD
SVRNGRAFET EPADNLRTLA LVEAVYRQGE TASEAFLERT PRIGA
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