| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6268 |
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| Symbol | |
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| ID | 7975484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 1006902 |
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| End bp | 1008020 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644796838 |
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| Product | ABC transporter related |
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| Protein accession | YP_002948097 |
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| Protein GI | 239820912 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAGCAG TCCATCTCGA AAACATCTTC AAGCGCTACA AGGGCACGGC GCAGCCCGCC
GTCGACGACG TGTCGCTGTC CGTGCAGGAC GGCGAATTCA TGGTCCTGCT CGGCCCCTCG
GGCTGCGGGA AGTCGACCAC GCTGCGCATG ATCGCGGGGC TGGAGGCGAT CAGCGAAGGC
TCGCTGGCCA TCGACACGCG CAAGGTCAAC GAGGTGCCCG CCAAGGACCG CGACATTGCC
ATGGTGTTCC AGTCCTATGC GCTCTATCCG CACATGACGG TGGCCGACAA CCTGTCGTTC
GGACTTCGAA GGCGCAGGGT CGACAGCCAG CAGATCGCCG CGCGCGTGAA GTCGGCCGCC
GGCATCCTGG GCCTGAACGA GCTGCTGGCG CGCAAGCCCG CGGCGCTGTC GGGTGGGCAG
CGGCAGCGCG TGGCGCTGGG CCGCGCGATC GTGCGCGAAC CCAAGGTCTT CCTGTTCGAC
GAGCCGCTGT CGAACCTCGA CGCGGCGCTG CGGGTGAACA CCCGCAACGA GCTGGTGCGG
CTGCACCGCC GGCTGGGCGC GACCATGATC TATGTGACGC ATGACCAGGT CGAGGCCATG
ACCATGGGCC AGCGGATCTG CGTCATGAAC AAGGGCAAGG TGGCCCAGGT CGGCAAGCCG
CTGGAGGTCT ACCGCGCGCC GGCCGATGCC TTCGTCGCGC GTTTTCTCGG CAACCCGCCG
ATGAACATCC TCAAGGCGTG CATCGTGCAG GGCCCGTCCT CTGCTGTCGC GGCACTGGGC
GGGAGCGAAC TTCCGCTGGC CCGCTGGGCC CGCGCCGCGC TGCCTCCGGC GGGTGAACTG
CTGGTGGGCG TGCGGCCCGA GGAACTGCAA TTGCACGAGG TCCGCGAGGG CGGCGGCACG
CTGCGGGGCG TGGTCTCGGC CATCGAGCCG CTGGGTGCGG AGACGCTCCT CATGGTCTCG
CTGGAGGGCG ATGCCGGCGA TGTCATGGCC CGCCTGCACC GCGACGTGAA AAGCAGCATC
GGCGATCGCG TGGGCCTGAC CATTCCGGAC GAGGCGCTTT ATCTGTTCGA TGCCTTCACG
GAGAAGGCGA TCCCCGCCGC CGACGTGGGC GCGCCATGA
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| Protein sequence | MAAVHLENIF KRYKGTAQPA VDDVSLSVQD GEFMVLLGPS GCGKSTTLRM IAGLEAISEG
SLAIDTRKVN EVPAKDRDIA MVFQSYALYP HMTVADNLSF GLRRRRVDSQ QIAARVKSAA
GILGLNELLA RKPAALSGGQ RQRVALGRAI VREPKVFLFD EPLSNLDAAL RVNTRNELVR
LHRRLGATMI YVTHDQVEAM TMGQRICVMN KGKVAQVGKP LEVYRAPADA FVARFLGNPP
MNILKACIVQ GPSSAVAALG GSELPLARWA RAALPPAGEL LVGVRPEELQ LHEVREGGGT
LRGVVSAIEP LGAETLLMVS LEGDAGDVMA RLHRDVKSSI GDRVGLTIPD EALYLFDAFT
EKAIPAADVG AP
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