| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6260 |
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| Symbol | |
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| ID | 7975476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 997947 |
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| End bp | 998945 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796830 |
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| Product | hypothetical protein |
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| Protein accession | YP_002948089 |
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| Protein GI | 239820904 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCTCA CGACTTCGCG GCTGCGCCGC CTGATCTTCA AGGCCGGTGC CTCGGCCGTC
CTGTCCATCA GCGCCGCGAG TGCCTTCGCG GCCTACCCCG ACAAGCCCAT CAAGCTGATC
GTGCCGTATC CGCCGGGCGG CGCGACCGAC GTGATCGGCC GGATCATCGC GCTCAAACTG
GGCGAGCAGC TCGGACAGCA GGTGGTCGTC GACAACCGGG GCGGCGCCGG CGGCAACGTG
GGCGCCGAAG CCGCTGCCAG GTCTGCGCCG GACGGCTACA CCTTGCTGAT GGGTGCGCTC
ACCTCCCATG CAACCATGGC CACGCTGGAG AAGGGAAAGA TCCGCTACAG CATCACCAAG
GACTTCGCGC CCGTCATGGT GGTGGGGTCG GTGCCGCTGG TGGTGGTCGT GAACCCCAGG
CTTGCGGTGA AAGACCTCAA GGAGCTGGTC GCCTATGGCA AGGCCAACCC CGAAAAGCTG
AACTACGCGT CGTCGGGCGC GGGCGCGCCG CAGCGCCTGG CCGCCGAGAT CATCCGCAGC
GATGCGAAGA TCAGCATGAC GCACATCGCC TACAAGGGCA GCGGTCCCGC GATGACGGAT
CTGGTGGGCG GGCAGGTGAA CATGATGGTC GAGACGGTGC CCGCGGCGCT GCCGTTCATC
GTCTCGGGCA AGCTGCGTGC GCTGGCGGTA ACGATGCAGG GGCGCATCTC GATGCTCCCG
GAGGTGCCGT CCGCGGTCGA AGCCGGGATG CCGGCGCTGG ACATCGCATC GACTTTCGGC
GTGCTCGCTC CCGCCGGCAC GCCCGAGGCC ATCGTTGCGC GGCTGAACGA AGCATTGGCC
GGGCTGGTTC GATCGCCCGA GGTCAAGGAC ATGCTGCTCA AGCAGGGCGT CTATGTGGCA
GAGCCGACGA CGCCGGCGCA AACGGCAAAG CGCATCGAGC TCGAGGTGGC CCGCTGGGAG
AAACTGATCA CCACGGCCCA CATCAAGGCG GACGAATGA
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| Protein sequence | MPLTTSRLRR LIFKAGASAV LSISAASAFA AYPDKPIKLI VPYPPGGATD VIGRIIALKL
GEQLGQQVVV DNRGGAGGNV GAEAAARSAP DGYTLLMGAL TSHATMATLE KGKIRYSITK
DFAPVMVVGS VPLVVVVNPR LAVKDLKELV AYGKANPEKL NYASSGAGAP QRLAAEIIRS
DAKISMTHIA YKGSGPAMTD LVGGQVNMMV ETVPAALPFI VSGKLRALAV TMQGRISMLP
EVPSAVEAGM PALDIASTFG VLAPAGTPEA IVARLNEALA GLVRSPEVKD MLLKQGVYVA
EPTTPAQTAK RIELEVARWE KLITTAHIKA DE
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