| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6258 |
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| Symbol | |
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| ID | 7975474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 996066 |
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| End bp | 996830 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644796828 |
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| Product | transcriptional regulator, IclR family |
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| Protein accession | YP_002948087 |
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| Protein GI | 239820902 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCACCC CATCCAACCG TTCGCTCGAA CGCGGAATCG AGATCCTGCG TGCCTTCCGG
CCCGGCTCCA CGCTGCTGGG CAACGGTGAG CTCGCGGAGC GCACCGGCCT GGCGCCAGCC
ACCGTGAGCC GCCTGACGCA GACGCTGGTC GGCGCGGGAC TGCTCGAGCA CGACCGGCGC
GCGCGCGCCT ACCGGCTCGC GGCGCCGGTG CTGAGCTTCG CGCATGCCAT GCGCACCGGC
TCCACCGTGC TGCAGGTGGC TGCCCCGCGG ATGCGGGCGC TGGCCGAGAA ACTGCGCATC
AACGTCGGGC TCGCGGTCGC CGACCGTTCC GAGATGCTGT ACCTCGAATC GATCCGCTAC
AACAAGAAGG CGTCGCTGCG CAGCGTGGTG AGCGGACAGC GCGTGCCGAT CGAGCTCACC
TCGCTCGGCC GTGCCTGGCT GGCAACGGCG CCGCCGGCGC GGCGCGCCGA ACTGGCGAAG
GAGTTCGAGG CGCGCCGCAG CAATTGGCCG CGGCTTCGCA GGGAGATCGA CAGGGCCATC
GAGAGCGTGC GCCGCCGCGG CTGGTGCGTG GCCTCGTGGC AGCCCGAGAT CGTTGCGCTG
GCCATGCCGC TGGCGCTTCC GAACGAGCCC GTGCACGTGC TCAATGCGAG CCTGTCCACC
AGCGATCCGG CGAACGAGGT GGCGCTCGAA CTGGGTGCGC CGCTGCTGGC GCTCGGCGAG
CAGATCACCC GCGAATTCAT CGCGCGCGGC GGCAGTCTGG CGTAG
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| Protein sequence | MPTPSNRSLE RGIEILRAFR PGSTLLGNGE LAERTGLAPA TVSRLTQTLV GAGLLEHDRR
ARAYRLAAPV LSFAHAMRTG STVLQVAAPR MRALAEKLRI NVGLAVADRS EMLYLESIRY
NKKASLRSVV SGQRVPIELT SLGRAWLATA PPARRAELAK EFEARRSNWP RLRREIDRAI
ESVRRRGWCV ASWQPEIVAL AMPLALPNEP VHVLNASLST SDPANEVALE LGAPLLALGE
QITREFIARG GSLA
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