Gene Vapar_6241 details

Gene Information

• Locus tag: Vapar_6241
• ID: 7975457
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012792
• Strand: +
• Start bp: 977515
• End bp: 978192
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 644796811
• Product: Isoprenylcysteine carboxyl methyltransferase
• Protein accession: YP_002948070
• Protein GI: 239820885
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG2020] Putative protein-S-isoprenylcysteine methyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATCCGC TCTACAAGAA AGTCATCGCG CAAGGGGTTG CGGGAATGGC CGTTCTCGTT 
GCCTTCATCT TCTTGCCCGC GGGCACGTGG CAATACTGGC AAGGCTGGCT CTTTGTCGCC 
GTCTTTTCTC TCTCGACCAT CGGCTTCACT GTCCATCTTG CCCTTCATGA CAGGCCGCTG 
CTCGAGCGCC GCATGAATGC CGGACCGCAG CATGAGAAAG AGTGGCCGCA GAAGATCATT 
GTGTCGCTCA TCATCCTCGC GTTTTTCATC TTCATCATCC TGCCCGCACT CGATCATCGA 
TTTGGCGTCT CGCCGGTTCC CGCCTACATG TCCCTTGCAG GGAACATCGT GATCGTGGCG 
TCCTTCCTCT TTATTTTCTG GGTGCTGAAG GTCAATAGTT ATGCAGCAGC CAACATCAGC 
GTCGCGGGCG ACCAGAAGGT GATCGACAGC GGCCCCTACG CCCATGTGCG TCATCCTATG 
TACGCTGGCG CGCTCTGGCT TTTCATCGGC ATGCCGCTCG CACTTGGCTC GTGGCTCACG 
ATCTGCCTCC TCCCGCTCGT CCTGCCGGTG CTGATCTGGC GACTTCTTGA TGAGGAAAAG 
ATCTTGCGCC GTGATCTTCC CGGCTACAAC GAATACGCAA GCCGTGTGCG TCATCGCCTC 
ATTCCCTATG TCTGGTAG 

 

Protein sequence

MDPLYKKVIA QGVAGMAVLV AFIFLPAGTW QYWQGWLFVA VFSLSTIGFT VHLALHDRPL 
LERRMNAGPQ HEKEWPQKII VSLIILAFFI FIILPALDHR FGVSPVPAYM SLAGNIVIVA 
SFLFIFWVLK VNSYAAANIS VAGDQKVIDS GPYAHVRHPM YAGALWLFIG MPLALGSWLT 
ICLLPLVLPV LIWRLLDEEK ILRRDLPGYN EYASRVRHRL IPYVW