| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6233 |
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| Symbol | |
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| ID | 7975449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 968283 |
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| End bp | 969410 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796803 |
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| Product | VWA containing CoxE family protein |
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| Protein accession | YP_002948062 |
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| Protein GI | 239820877 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTCCG AAGAAACCCT GCGCCGCTGG CGCCTGATCC TCGGCCGCTA TGCGGCGCAA
CCTCTGTCGC AAACGCAGTT CTCGGCGGGC GACTGGAAGC TCGACCAGGC GCTCGAATAT
CTCTACGGCC GCGAATACGA AGGCCGCGGC CTGGCCCGGC CGAGCGGCGG GCCGGGTTCG
CTCGACCCAA GCCAGTTGCG CGCGGTCGAC TGGCTCAACC GATCGCGGAG TCTCTTTCCG
CAAGAGGTCT TCGAGCGCAT GCAGACGCAG GCGATCGATC GCTACCAGCT GACCGACCTG
CTCTCCGACC CGGCGGTGCT GCGCTCGCTC GACGCCACGC CCGGCCTCGC CAAGGCACTG
CTGGGCATGC GCGGGCGGCT GTCGGGCCAG ATGCGCGACG CGGTGCGCGA GGTGATCCAG
AAAACCGTCG ACGAGATCAC GCGCAAGCTC AGGAACGACT TTGTCAACGC GCTCGTCGGC
CGGCGCAACC GCATGCGGCG CTCGCACATC AAGAGCGCAC AGAACTTCGA TGCGCGCGCC
ACCATCGCGG CCAACCTCAA GCATTACGAC GTGGAGCGCA AGCAAATCGT CATCGAGCAT
CCGCGCTTCA ATGCGCGCGT GAAGCGCAAC CTGCCCTGGG ACGTGGTGCT TTGCGTCGAC
CAGAGCGGCT CGATGATGGA TTCGGTGATC TACAGCGCCG TCATTGCCGG CATCATGAGC
TCGCTGCCCG CGGTGCGAGT GAAGCTGGTG GTGTTCGACA CCAGCGTGGT CGACCTCACG
CACCTGGCGC ACGATCCGGT CGAGGTGCTG CTCACGGTGC AACTCGGCGG CGGTACCGAC
ATCGGCCGTG CGGTGGCGTA TTGCGAGTCG CTGGTGGGCA ACCCGCAACG CACGGTGTTT
GCGCTCATCA GCGACTTCAT GGAAGGCGCC GCGCCCGGGC CGCTCCTGGC CGCGGTGCAG
CGCATGGCAC AGTCGCGCGT CAAGCTGCTC GGGCTGGCCG CGCTGGACGA ATCGGCCAAC
CCCGTGTACG ACCGGCAAAT GGCGCAGCGC CTGGCCGACA AAGGCATGCA CGTTGCGGCC
CTCACGCCCA CGCATTTCGC GCAGTGGCTC GCGGAAGTGA TGAACTGA
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| Protein sequence | MSSEETLRRW RLILGRYAAQ PLSQTQFSAG DWKLDQALEY LYGREYEGRG LARPSGGPGS
LDPSQLRAVD WLNRSRSLFP QEVFERMQTQ AIDRYQLTDL LSDPAVLRSL DATPGLAKAL
LGMRGRLSGQ MRDAVREVIQ KTVDEITRKL RNDFVNALVG RRNRMRRSHI KSAQNFDARA
TIAANLKHYD VERKQIVIEH PRFNARVKRN LPWDVVLCVD QSGSMMDSVI YSAVIAGIMS
SLPAVRVKLV VFDTSVVDLT HLAHDPVEVL LTVQLGGGTD IGRAVAYCES LVGNPQRTVF
ALISDFMEGA APGPLLAAVQ RMAQSRVKLL GLAALDESAN PVYDRQMAQR LADKGMHVAA
LTPTHFAQWL AEVMN
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