| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6213 |
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| Symbol | |
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| ID | 7975429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 943259 |
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| End bp | 944431 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644796783 |
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| Product | beta-lactamase |
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| Protein accession | YP_002948042 |
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| Protein GI | 239820857 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.108983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCCCTC CGGACAATGG CAACTCCGAC GGCTATCCGC ATGCGTTGGA GTCCATCGGC
ACAGTGCGCC AGATCTACGA CGGCGCACTC TCCCCTGAAC TGGCGGTCAA TACCTACCGC
AACATCGACC GCTTGTTTCC CACGCGCACT GTCGAGCCCG GCGGCACGCC GTCTGCGTTG
CCCGCTGCGG CCGCGCGGCT CACACAGGTG AACTTCACGG TGAGTGCTGC GAGATACAGC
CTCGCCGACT TCATGTCGGT GAATCGTGTT GCCGGTCTGC TCATCCTGAA GGACGGCAAG
ATCGTCCATG AGACCTATCA GTACGGCAAC ACGCAACGCA CGCGCTGGAT GTCGATGTCG
GTGGCCAAGT CGATCACCTC GACGCTGATC GGCGCGGCCG TGAAGGACGG CTACATTGCC
AGCATCGATG ACCAGGTCAC CAAGTACGTG CGCCGGCTGG TGGGCAGCGC CTACGATGGT
GCGACGGTCC GCAATGTGAT GATGATGGCT TCGGGCGCGC AGTGGAATGA GACCTACACC
AACCCGAACT CCGATCGGCG CCAATTGCTC GAGGCGCAGA TCAGCCAGAA GCCGGGCTCG
GCCATGGATC TCATGAGCAA GCTGCCGCGC GCGGCGGCAC CGGGCTCCGT CTACAACTAC
AGCACCGGCG AAACACAGGT GGCCGGCGAG ATCGTCTACA ACGCGGTCAA GAAACCCCTG
GCGCAATATC TCTCCGAGAA GATCTGGTCG AAGGCCGGGA TGGAGGCGCA GGCCAACTGG
TGGCTCGACT CACCCAACGG CGTGGAGATC GGCGGCAGCG GCATCAGCGC CACCTTGCGC
GACTACGGAC GCTTCGGCCT GTTCGTGATG AACGATGGTG TGGCTGCCGG CCAGCAGGTG
GTGCCGGTCG GATGGGTCAC GGACGCGGGC ACGCCCAAGG TGCTGACAAG TGGCAACTCG
ATCAACTACG GCTACCTGTG GTGGATACCG CCGAGCGGCC CCTCGGCCGC AGACGGCGCC
TTCTACGCGA ACGGCATCAT GGGCCAGCAG ATCTACGTCA ACCGCAAGGA AAAGGTGGTC
ATCGTCGTCT GGGGCGCGCA GACCGACCCC GCGGGAAACG GCACCTTGCC GGTGGTGCCG
TTCTTTGATG CCGTGGTGGC GGCGCTCAAG TAG
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| Protein sequence | MTPPDNGNSD GYPHALESIG TVRQIYDGAL SPELAVNTYR NIDRLFPTRT VEPGGTPSAL
PAAAARLTQV NFTVSAARYS LADFMSVNRV AGLLILKDGK IVHETYQYGN TQRTRWMSMS
VAKSITSTLI GAAVKDGYIA SIDDQVTKYV RRLVGSAYDG ATVRNVMMMA SGAQWNETYT
NPNSDRRQLL EAQISQKPGS AMDLMSKLPR AAAPGSVYNY STGETQVAGE IVYNAVKKPL
AQYLSEKIWS KAGMEAQANW WLDSPNGVEI GGSGISATLR DYGRFGLFVM NDGVAAGQQV
VPVGWVTDAG TPKVLTSGNS INYGYLWWIP PSGPSAADGA FYANGIMGQQ IYVNRKEKVV
IVVWGAQTDP AGNGTLPVVP FFDAVVAALK
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