| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6196 |
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| Symbol | |
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| ID | 7975086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 928886 |
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| End bp | 929179 |
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| Gene Length | 294 bp |
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| Protein Length | 97 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644796766 |
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| Product | prevent-host-death family protein |
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| Protein accession | YP_002948025 |
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| Protein GI | 239820840 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01552] prevent-host-death family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.387945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCATTGA GAGCATCGGA CATTGTTCCC ATCAGCGAAG CGCGCACCCG GCTCACCGAA
CTGGCCGAAG ACGTGGTCCG CAGCGGCGCG GAGAAGGTGC TGACCAAGAA CGGCGCGAGC
TACGTTGCCT TGGTCGATGC ACGCCGGCTG GACTACTACC ATGCCCTCGA GTCGGAGCAC
GCCAGCCTTG TGCTGGCCGA GGACGCCATC ACCGGCCTGC GGCAGGCCTT GGCAGGCCAG
TTCGTGTCTG ACGAGGAACT GGACCGGGCA CTCGGTGTCG CATCGGCGCC GTGA
|
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| Protein sequence | MPLRASDIVP ISEARTRLTE LAEDVVRSGA EKVLTKNGAS YVALVDARRL DYYHALESEH
ASLVLAEDAI TGLRQALAGQ FVSDEELDRA LGVASAP
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