| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6187 |
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| Symbol | |
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| ID | 7975077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 918914 |
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| End bp | 919966 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644796757 |
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| Product | 6-phosphogluconolactonase |
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| Protein accession | YP_002948016 |
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| Protein GI | 239820831 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2706] 3-carboxymuconate cyclase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACGCCT ACGTTGGCAG TCGCACCACC CGAGAGCGCA ACGCGCGTGG CGAGGGCATC
AGCATCTTCA AAGTCGATTC CGCGAAGGGA ACGCTGGAGC CCGTCGACGT CGTCAGGAAC
CTCGTGAATC CGTCCTTCCT GGCGCTCAGT GCCAACGGCG AATTCCTCTA CGCCGTGCAC
GGCGACGAGA GCGAAGCGAG CGCCTTCAAG GTGAACCGCA GCACGGGCCT CCTCACCTTC
ATCAACCGGC AGAGCACGCA GGGCAAGAAC CCGGTGCACC TGGCGCTGGA TCCGACGGGC
CGCTTCCTGG TGGTGTCGAA CCACATCGGC GCAAGCCTGG CGGTGCTGCC CGTGAACGTC
GATGGCTCGC TGGGCGGGCT GACCCAGCTC GTGAGGCTCG ACGGTCCCAT CGGACCACAC
CGCATCGAAC AGAAGCAGGC GAAACCGCAC TTCAATCCCT TCGATCCGAG CGGCCGCTTC
GTCGTCGTGC CGGACAAGGG GCTGGACCGG GTGTTCAGCT TCCGGTTTGA AGAAGGCCGC
CTGACGCCCG CGCCGGTGCC GTTCGTCGCC ACGCGCGAAA CCGCAGGGCC ACGCCACCTG
TCTTTCCATC CCAAGGCGCC GTTCGCCTAT GTGGTCAACG AACTCGACTC GACCGTGACG
GCCTATCGCG TCACTCCCGC AACCGGCGCA CTTGCGCCAT TCCAGGTCCT GTCTGCGCTG
CCCGACAACT TCACCGGCAA CAGCCGCGCT TCCGAGCTGC AGATCGACGC GCAGGGGCGC
TTCCTGTATG CCTCCAACCG CGGCTACGAC AGCATCGCCG TGTTCAGCAT CGACCCGTCC
ACCGGCGCGC TGAAGTTCAT CGAGGCCGAA CCCACGCAAG GCAAGACGCC ACGGTTCTTC
ACCCTCTCGC CGGACGGGCG TTTCATGTTT GCGCTCAACG AGGACAGCGA CTCCATCGTG
ACGCTGGCCG TCGACCTTTC GACCGGCACG CTCAAGCCCA CAGGCGCGTC GGTCAGGTCA
GGCAGCCCGG TCTGCATGGT CTTTTCTGCA TGA
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| Protein sequence | MYAYVGSRTT RERNARGEGI SIFKVDSAKG TLEPVDVVRN LVNPSFLALS ANGEFLYAVH
GDESEASAFK VNRSTGLLTF INRQSTQGKN PVHLALDPTG RFLVVSNHIG ASLAVLPVNV
DGSLGGLTQL VRLDGPIGPH RIEQKQAKPH FNPFDPSGRF VVVPDKGLDR VFSFRFEEGR
LTPAPVPFVA TRETAGPRHL SFHPKAPFAY VVNELDSTVT AYRVTPATGA LAPFQVLSAL
PDNFTGNSRA SELQIDAQGR FLYASNRGYD SIAVFSIDPS TGALKFIEAE PTQGKTPRFF
TLSPDGRFMF ALNEDSDSIV TLAVDLSTGT LKPTGASVRS GSPVCMVFSA
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