| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6183 |
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| Symbol | |
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| ID | 7975073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 914854 |
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| End bp | 916353 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796753 |
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| Product | protein of unknown function DUF112 transmembrane |
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| Protein accession | YP_002948012 |
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| Protein GI | 239820827 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGTTT TCACGCTATT GGGGCAAGGC CTGCTGGTGG CCATCCAGCC CGGCAATCTG
CTTTTCGCCG GCATCGGCGT GCTGCTGGGC ACGCTGGTCG GCATCCTGCC CGGCATCAGC
CCGTCGCTGA CGGTGGCGCT GCTGCTGCCC ATCACCTTCA AGCTCGATCC GACCGGCTCC
ATCATCATGT TCGCCGGCAT CTATTTCGGC GGCATGTACG GCAGCTCGAC GACCGCGATC
CTGCTCAACA CGCCCGGCGA GGCGGCCTCG ATTGCCACTG CGATCGAGGG GCACCGGATG
GCGAAGGCCG GGCGCGGCGG GCCTGCACTC GCCACGGCGG CCATCGGCTC CTTTGTCGCG
GGCTTGATCG CGACGATCGG CATCTCGGTG CTCGCACCGT GGCTTGTCGA CTTCGCGGTG
CAGTTCGGTC CGTGGGACTA CTTCGCACTC ATGGTGCTGG CCTTTGTCAC GGTGTCGGCC
ACCTTCGGCG ACTCGGTGCT GCGCGGCATC ACGAGCCTTG CGCTGGGATT GGTGCTTGGC
CTGGTCGGCA TCGACAAGCT CACGGGCCAG TCGCGCCTGG CCTTCGGCAT TCCCGCCCTG
CTCGACGGTG TGTCGATCAC GACACTGGCC GTGGGCTTGT TCGCGATGGG CGAGACGCTC
TTCATCGCCT CGCGCTTCAC CGGCGTGCAG GAAAAGATCG AGGCCGTGCG CGGCTCGCTC
TGGATGACGA AGGAAGACTG GCAGCGCTCG TGGAAGCCAT GGCTGCGCGG CATCGGCTTG
GGCTTCCCGA TTGGTGCGCT GCCTGCAGGC GGCGCCGAAG TGCCGACGCT GCTGTCGTAC
ACGCTCGAGC GCAAGCTCGC GGTGAAGCCC GAGGAGTTCG GCAAAGGTGC GATCGAAGGG
GTGGCAGGCC CGGAAGCGGC CAACAATGCG GCGGCGACCG GCACGCTGGT GCCGCTGCTG
GCGCTGGGCC TGCCGACCTC TGCCACCGCC GCGATGATGC TCGCGGGCTT CCAGCAGTAC
GGACTGGTGC CGGGCCCACT GCTCTTCGTG ACCAACGCCG ATCTGGTCTG GGGCCTGATC
GCCAGCTTCT TCATCGGCAA CCTGATGCTG CTGGTGCTCA ACTTGCCGCT GGTCGGCCTG
TGGGTGCGGC TGCTGAAGGT GCCGCAGCCG TGGCTCTACG CGGGCATCCT CGTGTTCGCA
GTGATGGGAA CGCTGGCCGC GAACCCGTCG ACGGTCGAAC TCGTGATGCT CGTGACCTTC
GGCATCTGCG GCTACCTGAT GCGCTGCTGG GACTACCCGG TGGCGCCGAT GATCGTCGGA
CTCATCCTGG GCCCGATGGC GGAGAGCCAA TTCCGGCGCG CGCTGCAGAT CAGCCTGGGC
GACGGCCTCG TGTTCTTCAA GCACGCGGGC TCGGCCACGC TGCTGGCGCT GGCGCTGTTC
GCGCTGGTCG CTCCGCTGAT CTTCAAGAGT TTGAAACGGT TCAAGGGCGA CGACGCCTGA
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| Protein sequence | MEVFTLLGQG LLVAIQPGNL LFAGIGVLLG TLVGILPGIS PSLTVALLLP ITFKLDPTGS
IIMFAGIYFG GMYGSSTTAI LLNTPGEAAS IATAIEGHRM AKAGRGGPAL ATAAIGSFVA
GLIATIGISV LAPWLVDFAV QFGPWDYFAL MVLAFVTVSA TFGDSVLRGI TSLALGLVLG
LVGIDKLTGQ SRLAFGIPAL LDGVSITTLA VGLFAMGETL FIASRFTGVQ EKIEAVRGSL
WMTKEDWQRS WKPWLRGIGL GFPIGALPAG GAEVPTLLSY TLERKLAVKP EEFGKGAIEG
VAGPEAANNA AATGTLVPLL ALGLPTSATA AMMLAGFQQY GLVPGPLLFV TNADLVWGLI
ASFFIGNLML LVLNLPLVGL WVRLLKVPQP WLYAGILVFA VMGTLAANPS TVELVMLVTF
GICGYLMRCW DYPVAPMIVG LILGPMAESQ FRRALQISLG DGLVFFKHAG SATLLALALF
ALVAPLIFKS LKRFKGDDA
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