Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_6177 |
Symbol | |
ID | 7975067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | - |
Start bp | 908982 |
End bp | 909770 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644796747 |
Product | enoyl-CoA hydratase |
Protein accession | YP_002948006 |
Protein GI | 239820821 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGATG AAACCATCGC GCCGCAGGTG CAAATGTCGG TCCAGGACCA CGTATGCGTG ATCTCGCTGG ACAACCCGGC GAAGAAGAAC GCCATCACGC CGGAAATGAT GCAGCAGCTG TCGCAGCACC TCACGGCTTT CGACGATGAC GACGAGCTCT GGGTGGCCGT GCTGGACCCG GCGGGCGAGC ACACCACCGC GGGGCTGGAC ATGCCGAAGT TCTTCGGCCC GGGCGCAACC GCGAAGCCGA TCCCGCCGCA GCAGGTGGAT CCGCTCGGGC TGGGCCGGCG CTGCCGCAAG CCGGTGATCT CCGTCGTGCA CGGCATCACC TACACAGTGG GCATCGAGAT GATGCTCGCG GCCGACATCG TCATTGCGGC CGACACGGCG CGCTTTCACC AGCTGGAGGC CAAACGCGGC ATTGCGCCGC TGGGCGGGGC GCACTTCCGC TACCTGCAGC GCATGGGCTG GGGCAATGCG ATGCACCTGC TGTTCCTGTG CGAGGAGTTC TCGGCGCAGC GCGCGCTGGA GGTCGGCCTG GTGCAGGAGG TTCATTCCTA CGGCGCCCAC CGCGAGCGCG CGCTCGACAT CGCTCGCCGC ATCTGCGCCT GTGCGCCCAT CGGCCTGCGC GCCACCAAGG CGGCGGCGCT GACGTACGTG CAGCAGGGCG AGGCCGCTGC GATCGCCGCC ATTCCCGAGA TCCGCAAGCA GGTCTTCGCC AGCGCCGACT TCAAGGAAGG CCTTCAGTCG TTCATGGAAC GGCGCGAGGC CCGCTTCCAG GGCCGCTGA
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Protein sequence | MADETIAPQV QMSVQDHVCV ISLDNPAKKN AITPEMMQQL SQHLTAFDDD DELWVAVLDP AGEHTTAGLD MPKFFGPGAT AKPIPPQQVD PLGLGRRCRK PVISVVHGIT YTVGIEMMLA ADIVIAADTA RFHQLEAKRG IAPLGGAHFR YLQRMGWGNA MHLLFLCEEF SAQRALEVGL VQEVHSYGAH RERALDIARR ICACAPIGLR ATKAAALTYV QQGEAAAIAA IPEIRKQVFA SADFKEGLQS FMERREARFQ GR
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