Gene Vapar_6177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_6177 
Symbol 
ID7975067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand
Start bp908982 
End bp909770 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content68% 
IMG OID644796747 
Productenoyl-CoA hydratase 
Protein accessionYP_002948006 
Protein GI239820821 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGATG AAACCATCGC GCCGCAGGTG CAAATGTCGG TCCAGGACCA CGTATGCGTG 
ATCTCGCTGG ACAACCCGGC GAAGAAGAAC GCCATCACGC CGGAAATGAT GCAGCAGCTG
TCGCAGCACC TCACGGCTTT CGACGATGAC GACGAGCTCT GGGTGGCCGT GCTGGACCCG
GCGGGCGAGC ACACCACCGC GGGGCTGGAC ATGCCGAAGT TCTTCGGCCC GGGCGCAACC
GCGAAGCCGA TCCCGCCGCA GCAGGTGGAT CCGCTCGGGC TGGGCCGGCG CTGCCGCAAG
CCGGTGATCT CCGTCGTGCA CGGCATCACC TACACAGTGG GCATCGAGAT GATGCTCGCG
GCCGACATCG TCATTGCGGC CGACACGGCG CGCTTTCACC AGCTGGAGGC CAAACGCGGC
ATTGCGCCGC TGGGCGGGGC GCACTTCCGC TACCTGCAGC GCATGGGCTG GGGCAATGCG
ATGCACCTGC TGTTCCTGTG CGAGGAGTTC TCGGCGCAGC GCGCGCTGGA GGTCGGCCTG
GTGCAGGAGG TTCATTCCTA CGGCGCCCAC CGCGAGCGCG CGCTCGACAT CGCTCGCCGC
ATCTGCGCCT GTGCGCCCAT CGGCCTGCGC GCCACCAAGG CGGCGGCGCT GACGTACGTG
CAGCAGGGCG AGGCCGCTGC GATCGCCGCC ATTCCCGAGA TCCGCAAGCA GGTCTTCGCC
AGCGCCGACT TCAAGGAAGG CCTTCAGTCG TTCATGGAAC GGCGCGAGGC CCGCTTCCAG
GGCCGCTGA
 
Protein sequence
MADETIAPQV QMSVQDHVCV ISLDNPAKKN AITPEMMQQL SQHLTAFDDD DELWVAVLDP 
AGEHTTAGLD MPKFFGPGAT AKPIPPQQVD PLGLGRRCRK PVISVVHGIT YTVGIEMMLA
ADIVIAADTA RFHQLEAKRG IAPLGGAHFR YLQRMGWGNA MHLLFLCEEF SAQRALEVGL
VQEVHSYGAH RERALDIARR ICACAPIGLR ATKAAALTYV QQGEAAAIAA IPEIRKQVFA
SADFKEGLQS FMERREARFQ GR