Gene Vapar_6172 details

Gene Information

• Locus tag: Vapar_6172
• ID: 7975062
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012792
• Strand: +
• Start bp: 905378
• End bp: 905941
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 644796742
• Product: Redoxin domain protein
• Protein accession: YP_002948001
• Protein GI: 239820816
• COG category: [C] Energy production and conversion; [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0526] Thiol-disulfide isomerase and thioredoxins

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCACGA GATCCAACGT GCTGATCGGC ATCGCGGCCG TTGCAGCCTC GGTCGGCATA 
TTCACCGCGG CGGCAGCGCC GTCCGGAGGC GACATACCCG CTAGCGCCGC GCAGACCGCG 
CCCGAGTTCC AGAACATCGA CCAGTGGCTC AACTCCCCGC CGCTGAAGCT GCAGGACCTG 
CGCGGCAAGG TCGTGCTCGT CGACTTCTGG ACCTACACCT GCATCAACTG CCTCAACCAC 
TTGCCCTACG TCCAGGCGTG GAACGAGAAG TACAAGGACA AGGGCCTCGT CGTCGTGGGC 
GTGCACACGC CGGAGTTCGC GTACGAGAAG TCCACCCGGA ACGTGCAGGA CGCGATCAGC 
CGGCTGCAGA TCAAGCACGC CGTTGCGCAA GACAACCACT ACGCCACCTG GAAGGCCTTC 
AACAATCAGT ACTGGCCGGC GGTCTACCTG ATCGACAAGC AGGGAAAGAT CGTCTACTCG 
CACTTTGGCG AAGGCAGCTA CGCCACCACC GAGAAAAAGA TTCAGTCGCT GCTGGCCGAA 
CCGGCGTCCG CGGCGGGAAG CTGA 

 

Protein sequence

MTTRSNVLIG IAAVAASVGI FTAAAAPSGG DIPASAAQTA PEFQNIDQWL NSPPLKLQDL 
RGKVVLVDFW TYTCINCLNH LPYVQAWNEK YKDKGLVVVG VHTPEFAYEK STRNVQDAIS 
RLQIKHAVAQ DNHYATWKAF NNQYWPAVYL IDKQGKIVYS HFGEGSYATT EKKIQSLLAE 
PASAAGS