| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6168 |
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| Symbol | |
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| ID | 7975058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 897530 |
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| End bp | 898543 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644796738 |
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| Product | histidine kinase |
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| Protein accession | YP_002947997 |
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| Protein GI | 239820812 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTGCA GCCCCTTGAA GTCCATCGGC ACCATCCATC CCAATACCGC CAGCGGCATG
GCGCTGGCCG CGGCCCGCGC GCTCGCCGTC CTCGCGTTCG GGCAGAACGC GCATGCGTCG
GCGCTTGCAC CAACGGCCTG CACGATCGGC GGCAGCACGC CGTGGCTCCT GGGCATGCCG
CTGCTCGCCG GCCTCGCGCT GGTGGCGGCG TTCCTCGGAT TCAAGCTCCG GGCCCACCGT
GCGAGTGCGG CGCGCCTGGC CGTCATGCTG GAACGCGCGG CAAGCGACGC CCGCATACCT
GCGCTGGAAG AAAGCGGTCC GGCCGACATC GGCCGGGTGG CGCGCGCGGT CAATACGCTC
GGCCGCCGGC AGGCCGAGCG CCAGGCGCAG CACCTGGACG TGCAGGCCGG CTATGCGCAC
GACCTGCGCA CGCCGCTCAC CCGCATGGGA CTGCGCTGCG AAATGCTCGG GGACGCCGAG
GCGCGCAAGG CCATGGAGCG GGACCTCGCC GAGATGCGCG AGCTGGTCGA GGGCAGCATC
GCCTGCGCGC GGATGCAGCA CAGCCTGGCC GAGCCGCTGC AGCGGGTCGA CGCCGATGGC
CTGATCGGCA ACCTGGTGCG CAACTACCGC GACTCGGGCC GTGCGATTGC GCTCGACGGA
TGCATCGGCC AGCCGGTGGT TGCCTGTCCC CTCGCGCTGC GGCGCGTGCT GGCCAACCTG
ATCGACAACG CCTTGCGCTA CGGCACGGAC GTGCGCGTTT GCGCCCGCGT CGATACGACG
AGCCTCGTGC TGGCCGTGGT CGACTCCGGC CCGGGCATCC GGCCGGCGCA GATCGACGCC
GTCCTCTCCC CCTGGGTGCG GGGGCAGCAG CTGCAAGAGG GCAAGCCCGG GTCCGGCCTC
GGCCTGGCGA TCTCCCGGCG CCTGGTGCAG GCGATGCAGG GCGAGCTCCA TCTGGAGAAC
CGCCGCAGCG GCGGGTTCGA GGCACGGTTG ACGCTGCCGC TCGTGGTTGC GTGA
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| Protein sequence | MTCSPLKSIG TIHPNTASGM ALAAARALAV LAFGQNAHAS ALAPTACTIG GSTPWLLGMP
LLAGLALVAA FLGFKLRAHR ASAARLAVML ERAASDARIP ALEESGPADI GRVARAVNTL
GRRQAERQAQ HLDVQAGYAH DLRTPLTRMG LRCEMLGDAE ARKAMERDLA EMRELVEGSI
ACARMQHSLA EPLQRVDADG LIGNLVRNYR DSGRAIALDG CIGQPVVACP LALRRVLANL
IDNALRYGTD VRVCARVDTT SLVLAVVDSG PGIRPAQIDA VLSPWVRGQQ LQEGKPGSGL
GLAISRRLVQ AMQGELHLEN RRSGGFEARL TLPLVVA
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