| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6161 |
|---|
| Symbol | |
|---|
| ID | 7975037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012792 |
|---|
| Strand | - |
|---|
| Start bp | 887173 |
|---|
| End bp | 888513 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644796716 |
|---|
| Product | Microsomal epoxide hydrolase |
|---|
| Protein accession | YP_002947990 |
|---|
| Protein GI | 239820805 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATT CCGACGCATC CAGCCGCCGC GCGGCGTTCC ACCTCACCCT CACGCGCCGC
GGTGCGCTGG TGGCAACGGC GGGCCTTCTT GCAGGTTCGG CGGCCGCGAC CTTTGCGGCG
ACCCCTGCGG ACAAGAGCGC CGCAGCGCAA GGCGACGCGA TACGGCCCTT CCGCATCGAT
GTTCCCGAGA ATGCGATCGC CGATCTGCGG CGGCGCCTCA GGGCCACGCG CTGGCCCGAC
CGCGAGACGG TCGGCGACAC CTCGCAAGGC GTTCAGCTGG CCAGGCTGCA GGCGCTGGTC
CGCTACTGGG AAACGGGCTA TGACTGGCGC AAGGTCGAGG CCAGGCTCAA TGCGCTGCCG
CAGTTCATCA CCACGATCGA CGGCGTCGAC GTCCAGTTCA TCCACGTGCG CTCCCGCCAT
CCGGACGCGT TGCCGCTGGT GCTGACGCAT GGCTGGCCGG GCTCGATGCT GGAGTTCCTG
AAAACAATCG GCCCCCTGAC CGACCCGACC GCCTTCGCAG GCAGTGCCGC CGACGCCTTC
CACGTCGTGA TCCCGTCCAT CCCCGGCCAT GGCTTTTCCG GCAAGCCCAG GGAGACAGGC
TGGGGCCCCG AGCGCGTGGG CCGCGCGTGG GACACGCTGA TGAAGCGGCT GGGCTACACG
CACTACGTGT CCCAGGGTGG AGACCACGGT TCGGTGATCT CGGATGCAAT GGCCCGCCAG
GCACCGCGAG GCCTGCGGGG CATCCACCTG AACATGCCCG CCACCGTGCC CGCGGAACTG
GTCAAGCCCA TCAACAATGG AGATCCCGCG CCGGCCGGGC TGTCGGCGTC CGAGCGCGCC
GCGTTCAACA CGCTCAGCGC CTTCTTCAAG ACCGGCGCCG CCTACGGTGC CATGATGGTG
ACGCGCCCGC AGACGATCGG CTATCCGCTG GCCGACTCGC CGGCGGGCCT GGCCGGGTGG
ATCTACGAGA AGTTCGCGCA ATGGACCGAC AGCGGGGGCG AACCCGAGCG CGTGCTCGGC
CGGGACGAGA TGCTCGACGA CATCACCCTC TACTGGCTCA CCGACACGGC CGCTTCCTCC
TCGAGGTTCT ATTGGGAGAA CAACAACAAC AATTTCAGCG CGGCGGCGCA GAAGACGCAG
GACATCTCGA TTCCGGTGGC CATCACCGTG TTCCCGGGCG AGATCTACCG CGCGCCCAGG
AGCTGGGCCG AGCGCGCCTA TCGAACGCTC TACTACTTCA ACGAAGCCGC CAAGGGCGGG
CACTTTGCCG CCTGGGAACA GCCGCAGCTG TTCAGCGAGG AACTGCGCGC GGCGTTCCGG
CCGCTGCGCC AGCCCGCCTG A
|
|---|
| Protein sequence | MTDSDASSRR AAFHLTLTRR GALVATAGLL AGSAAATFAA TPADKSAAAQ GDAIRPFRID
VPENAIADLR RRLRATRWPD RETVGDTSQG VQLARLQALV RYWETGYDWR KVEARLNALP
QFITTIDGVD VQFIHVRSRH PDALPLVLTH GWPGSMLEFL KTIGPLTDPT AFAGSAADAF
HVVIPSIPGH GFSGKPRETG WGPERVGRAW DTLMKRLGYT HYVSQGGDHG SVISDAMARQ
APRGLRGIHL NMPATVPAEL VKPINNGDPA PAGLSASERA AFNTLSAFFK TGAAYGAMMV
TRPQTIGYPL ADSPAGLAGW IYEKFAQWTD SGGEPERVLG RDEMLDDITL YWLTDTAASS
SRFYWENNNN NFSAAAQKTQ DISIPVAITV FPGEIYRAPR SWAERAYRTL YYFNEAAKGG
HFAAWEQPQL FSEELRAAFR PLRQPA
|
|---|
| |