Gene Vapar_6153 details

Gene Information

• Locus tag: Vapar_6153
• ID: 7975029
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012792
• Strand: +
• Start bp: 877344
• End bp: 877919
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 644796708
• Product: Carboxymuconolactone decarboxylase
• Protein accession: YP_002947982
• Protein GI: 239820797

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCACGCA TACCTCTTTT CCCGAGCGAC ACCATGAGCC CCGAGCAGCG CGCGGTCCAC 
GACAGGATCG TCGCCGGCCC GCGCGGCAGG ATCCAGGGCC CGCTGCGGGC CGCGCTGCAC 
AACCCGGAGC TGGCCGACAA GTGGCAGGCG CTCGGCGCGC TGCTGCGCTA CGGCACGGGC 
TTGCCGCCGC GGCTGTCGGA GCTCGCGATC CTGGTCACCG GCCATGCCTG CCACTCGCCC 
TTCGAGTGGT ACGCGCACCG CGCGGAGGCC GAGAAGGCGG GCATCGAGGC GCCCGTCATC 
GAAGCCATCC TGGCCGGCAC CGAGCCCCCC GGCCTGTCGG CGGACGATGC CGCCGTCTAC 
CGGTACGCCG TCGAGCTCAA CCGCCACAAC TCGGTCTCGG ATGCCACGTA CAACATCGCG 
CTGGCGCGCT TTGGGGCACG CACCGTGGTG GAGCTCACGG CGCTGGTCGG CTACTACACC 
ATGGTCGCGA TGACGCTCAA CTGCCACGAG ATTCCGCTGC CCGAAGGCGT GGTGCCGGCC 
TTTGCCCTGC CGCAGCACGC GGCGCTCGCC GAATGA 

 

Protein sequence

MPRIPLFPSD TMSPEQRAVH DRIVAGPRGR IQGPLRAALH NPELADKWQA LGALLRYGTG 
LPPRLSELAI LVTGHACHSP FEWYAHRAEA EKAGIEAPVI EAILAGTEPP GLSADDAAVY 
RYAVELNRHN SVSDATYNIA LARFGARTVV ELTALVGYYT MVAMTLNCHE IPLPEGVVPA 
FALPQHAALA E