| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6151 |
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| Symbol | |
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| ID | 7975027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 875316 |
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| End bp | 876287 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644796706 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002947980 |
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| Protein GI | 239820795 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCCCA GCAAAGCCAC GATCATCCAG CTCGACATTG CCTCGGACCT GCAGAAGTGG
CGCGCCTTCC TCGCCATTGC CGAACTGGGA AGCCTGACGC GCGCCGCGCT GTTCCTGGAC
AGCAGCCAGT CGCTGCTGAG CCGCCACCTC AACGCCCTGG AGCGTGAATG CAACGCGCGC
CTGTTCAATC GCACGGGCCG CGGCGTGCAG CTGTCGGAGG TGGGCCAGCG GCTCTTTCCG
CATGTGAAGG CGCTGCTCTC GGATGCCGAG CAGCTCCAGC TGGAGATTCG CGGCGAGGCG
CGCGAGCCGG CCGGCCGCGT CACCATCGGC TCGCTGCCCT CGGTCACCAA TCCGATCGTC
GGCAAGCTGT TCAATCGGCT GCAGGCGCGC CATCCCGGCA TCCAGCTCAA GATCCTCGAG
GGATCGAGCG GACAGGTGGA AGAGTGGCTG GCGGACGCGC GCGTGGACAT CGCGATCCTC
TATCGCTACG GCGCCGCGCT GCCGGAGCAG GAGCAGGCGC TTGCCACGGT GGACAGCTAC
CTGGTCGGCG CCGCGGGCGA CCGCCTGACC GCGAAGCCGG AGCTGCCGTT CAGCGCACTC
GACGGGCTCC CGTTCATCCT TCCGAGCGCA CCCAACGGAC TGCGCAGCGC GCTCGATGCG
CTCGCCCGCC AGCAGCACAT TGCCCTGTCG CCCGTGCTCG AAGCCGACTC GCTGCCGCTG
ATGCGTTCGG TCGTGGCGCA GGAGCGGCTC TACACGGTGC TGCCGCTGCA CGCGGTCTGG
TCGGAGGTGG AGGAAGGCCG GCTGCAGGCT TCGAAGATCG TCTCGCCGGG CCTGCAGCGC
ATCGTCTCGA TGATCCTGGC GCGCAGCAAG GGGCCGGGCA AGGCGGTCCA GGCCGTGGCT
GCGCAGATCG TGCAGGCGGT GGAAGAAAGC ACGCGGCAGG GGCTCTGGCG CGCGGGCGCG
CAGAGCGGCT GA
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| Protein sequence | MQPSKATIIQ LDIASDLQKW RAFLAIAELG SLTRAALFLD SSQSLLSRHL NALERECNAR
LFNRTGRGVQ LSEVGQRLFP HVKALLSDAE QLQLEIRGEA REPAGRVTIG SLPSVTNPIV
GKLFNRLQAR HPGIQLKILE GSSGQVEEWL ADARVDIAIL YRYGAALPEQ EQALATVDSY
LVGAAGDRLT AKPELPFSAL DGLPFILPSA PNGLRSALDA LARQQHIALS PVLEADSLPL
MRSVVAQERL YTVLPLHAVW SEVEEGRLQA SKIVSPGLQR IVSMILARSK GPGKAVQAVA
AQIVQAVEES TRQGLWRAGA QSG
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