| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6137 |
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| Symbol | |
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| ID | 7975583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 858421 |
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| End bp | 859479 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796693 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002947967 |
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| Protein GI | 239820782 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0504355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAACA TGCCCCCACC CCTCATTGAC GTCGAGCGCG CCACCGCCGC GAGCCGCATC
GCGCTCGCCG CCGGCACCGC GCTCGTGCTG ATCGCCGCCA GCCTGCCTTT GTGGGGCGAG
CCGAGCTGGA TGCGAGAGTT CGTCGAGATC GCCTGCTACT TCATCTTCGC GATGATGTGG
AACCTGCTCG CCGGCTACGG CGGCATGGTG AGCATCGGGC AGCAGGCCTT CTTCGGCTTC
GGCGGCTACG TCATGCTGAT GCTCGGCAAC TTCGCGGACG TCAACCCCTT CGTGGCGGTG
CCGCTGGGCG CGCTCGCGGC AGGGCTCATC GCCGTGCCCG TGTCCTTCGT CGCATTCCGA
TTGTCGGGCG GCTACTTCGC CATCGGCACC TGGGTGATCG CCGAGGTGTT CCGCCTGAGC
TTCGCCAACG TGTCGGCGGT GGGCGGCGGC TCGGGCACCA CGCTCACGGC GCTGCGCGGC
ATCGAACGCA CCACGCGCGA AAGAACCACC TACTGGATGG CGCTGGCCTG CGTGGTCGCG
GCCGTTGCGC TGGTCTACCT GTTCCTGCGC AGCAAGCGCG GGCTCGCGCT GCTGGCCATC
CGCGACAACG AGGTGGCCGC GGAGTCGCAG GGCGTTCCGG TGGCGCGCAT GAAGCTCGCG
GTGTATGTGG TGGCGGCCTT CGGTGCGGGA CTCGCGGGCG CGCTCTACTT CGTCGGCAAC
CTGCGCATCA GCCCCGACGC GGCCTTCAGC GTCAACTGGA CGGCGTTCGC GATCTTCATG
GTGGTGATCG GCGGCATCGG CCGCATCGAG GGGCCGCTGG TGGGCGCGCT GGTCTTCTGG
GCCTTGAACA AGTTCCTCAG CGACTACGGC ACCTGGTACC TGCTCGGGCT CGGGCTGCTG
GCCATCTGTG TGACGCTCTT CTTCAAGCAG GGGCTGTGGG GCTGGGCGCA TCAGCGCTGG
GCCTGGTCCC TGTTCCCGAC GCAGCGGCGG CTCCTGCCGC CCGCGCCTTC TTTTTCTTCT
TCCGACCTGG AGCGGGGCTT CCATGCGAAA CATCGATGA
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| Protein sequence | MTNMPPPLID VERATAASRI ALAAGTALVL IAASLPLWGE PSWMREFVEI ACYFIFAMMW
NLLAGYGGMV SIGQQAFFGF GGYVMLMLGN FADVNPFVAV PLGALAAGLI AVPVSFVAFR
LSGGYFAIGT WVIAEVFRLS FANVSAVGGG SGTTLTALRG IERTTRERTT YWMALACVVA
AVALVYLFLR SKRGLALLAI RDNEVAAESQ GVPVARMKLA VYVVAAFGAG LAGALYFVGN
LRISPDAAFS VNWTAFAIFM VVIGGIGRIE GPLVGALVFW ALNKFLSDYG TWYLLGLGLL
AICVTLFFKQ GLWGWAHQRW AWSLFPTQRR LLPPAPSFSS SDLERGFHAK HR
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