| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6126 |
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| Symbol | |
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| ID | 7975572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 847364 |
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| End bp | 848263 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644796682 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002947956 |
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| Protein GI | 239820771 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGATA CACCCGCGAA GCTCCCGCCG CTGACCGCCT TGCCCTGTTT CGACGCTGCG
GCCCGGCACC TGAGCTTCAC CAAGGCCGCC GAAGAGCTGC ATCTCACGCC GGGCGCCATC
AGCCGCGCCG TGAAGCACCT CGAGCAGCAA CTCGACGTGC AGCTCTTCGA GCGCGGCACG
CGCTCCGTGC GCCTCACCGA AGTGGGCGAG CCCTACGCCA AGGCCGTGCG CGATGTGCTG
GACCAGCTCG CTGCGGCAAC CGCCGCCGCC ACGGCCCGCC TGTCCGGCAG CACGCTCAAC
GTCAGCACCT CGGACGGTTT CGCCGGCCGC TGGCTGGTGC CTCGCCTGTA CCGCTTTCGC
CAGGCTCACG GCGACATCGA CGTGCGCGTT TCCACCACCG GCCGCCTCGC CAGCTTTCAC
GGTGACGGCA TCGACGTCGC CATCCGCTAT GGCGCCGGCA ACTACCCCGG CCTCACGGCC
GAGTGGCTGG CCGACGAAGA GGTCTTCCCC GTGTGCAGCC CCCGGCTGCT GAAAGGCCCG
CACGCCCTGC GCAAGCCCGC CGACCTGCGC CACCACACCC TCATCCGCGA CGGCTATCCC
ATCGCTTGGG CGGACTGGCT CGAGCGCGCC GGCGTCAAAG GCGTCAATGC CCGAAGCGGC
CTCGCCTTCG ACTCCTACAC CTTCGCCGTG CAAGCGGCGG TGCAAGGCGA AGGCGTGGTC
CTGGGTCGCA CCATGCTTGT CGCCGACGAC CTGGCCGCCG GCCGCCTGGT GCGGCCGTTC
AAGCAGGCGC TGAAGGCCTT TTCAAGCTTC TATCTTGTCT ATCCGCCGGA GGCCATGCGG
CAGCGGAAGG TGAAGGCGTT CAAGGAGTGG CTGTTGGAGG AGATGCGCAA CAGCGTCTAG
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| Protein sequence | MPDTPAKLPP LTALPCFDAA ARHLSFTKAA EELHLTPGAI SRAVKHLEQQ LDVQLFERGT
RSVRLTEVGE PYAKAVRDVL DQLAAATAAA TARLSGSTLN VSTSDGFAGR WLVPRLYRFR
QAHGDIDVRV STTGRLASFH GDGIDVAIRY GAGNYPGLTA EWLADEEVFP VCSPRLLKGP
HALRKPADLR HHTLIRDGYP IAWADWLERA GVKGVNARSG LAFDSYTFAV QAAVQGEGVV
LGRTMLVADD LAAGRLVRPF KQALKAFSSF YLVYPPEAMR QRKVKAFKEW LLEEMRNSV
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