| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6122 |
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| Symbol | |
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| ID | 7975568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 843926 |
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| End bp | 844798 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644796678 |
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| Product | fatty acid hydroxylase |
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| Protein accession | YP_002947952 |
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| Protein GI | 239820767 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3000] Sterol desaturase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.681475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACC TTCCCAACAT CATGTTCGCC GCCTTCCCGG CCTTTGCGCT GCTGATGGTG
GTCGAGCTTG TGTACTCCCT CAAGGTGCGC GGCGAGCTCT ACGACACCCG CGACACCGCC
GCCAACGTGC TGCTGGCGAT GGGCAACCTG GCCATCGCGC TGGCCAGCGC GGGCCTGATG
CTGGTGTTCC TGAGCTGGCT CTATGCGCAC CGCTTCTTCA CGATGCCGCC CGCGGCGTGG
TGGGCCTGGG TGCTGTGCTT TCTGGCGGAC GACTTCAGCT ACTACTGGTT CCACCGCTTC
AGCCACGAGG TGCGCTGGTT CTGGGCTTCG CATTCGGTGC ATCACTCTTC CGAGAAATAC
AACTTCTCGG TGGCCCTGCG CCAGACCTGG ACCGGCACGA TCAGCGGCTC TTTCTTGTTC
TGGGCCTGGA TGCCGCTCCT GGGCTTTCAT CCCAAGATGA TCCTGTTCAT GCAGTCGGCG
AGCCTGATCT ACCAGTTCTG GATCCACACG CAGGCGATCC GGAAGATGCC CGCCGGCTTC
GAGGCCGTGT TCAACACGCC GTCGCACCAC CGGGTGCATC ACGGCAGCGA CTTCGACTAC
CTCGACAAGA ACTACGCCGG CACCTTGATG ATCTGGGACC GCCTGTTCGG CTCGTTTGCG
CTGGAAACCT TCACGCCGCG GTTCGGCCTG ACGAAGAACA TCGAAACCTT CAACCCGCTG
CGGATCGCCT TCCATGAGTG GGCCGGCATT GCCAGGGACC TGCGCAAGGC CCGCAGCCTG
TCCGAGGTGG CCGGCTATCT CCTGCAGCCG CCGGGCTGGA GTCCCGACGG CAGTTCCCAG
ACCACGCGCC AGGCGCGCAG GGCGATGGAG TGA
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| Protein sequence | MNDLPNIMFA AFPAFALLMV VELVYSLKVR GELYDTRDTA ANVLLAMGNL AIALASAGLM
LVFLSWLYAH RFFTMPPAAW WAWVLCFLAD DFSYYWFHRF SHEVRWFWAS HSVHHSSEKY
NFSVALRQTW TGTISGSFLF WAWMPLLGFH PKMILFMQSA SLIYQFWIHT QAIRKMPAGF
EAVFNTPSHH RVHHGSDFDY LDKNYAGTLM IWDRLFGSFA LETFTPRFGL TKNIETFNPL
RIAFHEWAGI ARDLRKARSL SEVAGYLLQP PGWSPDGSSQ TTRQARRAME
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