| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6119 |
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| Symbol | |
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| ID | 7975565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 839819 |
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| End bp | 840991 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796675 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947949 |
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| Protein GI | 239820764 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGA ATCCATGGGC AATGGGTGCG GTGGCCGTGG CCGTCGCAGC GGTGGTGGTG
GCATGCGGCG GGGGCGGCTC GAATGGCGGC GGCTTTGCAG GCGGGCTCCC TGCCGGCACG
GGCACGCCCG GTGCTGGCGC TGGCGCAGGC ACTCCCACTG GCGGCACAGG CAACTCGACC
GGCACCGCCC CGGTAGCAGC CAATGACAGC GCCAGCGGCC AAGCCGGTGC CAGCGTCACC
CTCAACGTGC TCGACAACGA CCAGGATGCC GACGGCAACC TCGACCGCAA CTCGGTGCGC
TTCGTGCAGC CACCGGCCGA CGCCACCTTG TCCGGCGACG GGCGCAGCCT GCAGGTGCCC
AACGAGGGCA GCTGGCAGGT GGGCAGCGAG GGGGCGGTGG TGTTCACTCC CGCGAGCGGC
TTCACCGGCA GCCCGACGGT GGTCAGCTAC ACCGTGTCCG ATGCCACCGG GCTCACATCC
GCGGCCGCGA CGATCACGGT CACCGTCACG GTGGCGTCGG CCACCAGTTC GGCAGCCTGC
TTCAACGAAG GGTTCCTCCA CACCGGAACA ACCATGGATT TCGAATTCAC CGTCAGCGGA
GATGGCGCTA CGCCGCCCCG GCGCGTCGTG AGCACCGTCA CGGGACCCAA GGAGTTCAAT
GGCGCGGCGA CCATGGAGAC GAAGTCGGAT TTCTATGGGG ACGACGGCAG CTACGCAGGA
ACCAACATGG GCTACAACGC CTTCGTGGAC GGCTTCCTGG TGAGCTACGG CATGACCGGG
AGCAACGTCC GGCAGACGAT GAGCCCGCCG CGTCGGCAAC CGGTCGCCAT GGAGCCAGGA
CAGACCTTCG ATTTCACCTA CACGACCAGG AACGAATACG CCGACCGCGT CGAAGAAGGT
ACGACGACCA CGTCCTACAC CTACGTGGGC CGCGAGACCC TCCAGAGCGC TGCGGGAACC
TTCTCGGCCT GCAAGTTCAC CACCCATCAG GTGGACACGC CCATCACCTC CTCGCCCACG
ACGCAGACCT TCGACAAGAT CAGCTGGGTC GCCGCCGAGG GCCCGTATCG TGGGTTTGAA
CTGCGCACGG AGGTTGTGGC CCAGTACCCG AATGCACCCA CGATCCGCCA GGTGGTGCAG
CCCACCAAGG TCAGCGTTTT CGACATCAAG TGA
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| Protein sequence | MKKNPWAMGA VAVAVAAVVV ACGGGGSNGG GFAGGLPAGT GTPGAGAGAG TPTGGTGNST
GTAPVAANDS ASGQAGASVT LNVLDNDQDA DGNLDRNSVR FVQPPADATL SGDGRSLQVP
NEGSWQVGSE GAVVFTPASG FTGSPTVVSY TVSDATGLTS AAATITVTVT VASATSSAAC
FNEGFLHTGT TMDFEFTVSG DGATPPRRVV STVTGPKEFN GAATMETKSD FYGDDGSYAG
TNMGYNAFVD GFLVSYGMTG SNVRQTMSPP RRQPVAMEPG QTFDFTYTTR NEYADRVEEG
TTTTSYTYVG RETLQSAAGT FSACKFTTHQ VDTPITSSPT TQTFDKISWV AAEGPYRGFE
LRTEVVAQYP NAPTIRQVVQ PTKVSVFDIK
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