| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6103 |
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| Symbol | |
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| ID | 7975549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 818966 |
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| End bp | 820063 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796659 |
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| Product | histidine kinase |
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| Protein accession | YP_002947933 |
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| Protein GI | 239820748 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGAGT CTGCAACACT GCCGCGCCCC GGCGCGCAAG CGCTTTCCTC GAAGGACGAG
ATCGCACGGC TCAACAAGAT CGTCCAGGCC CTGATGGACC GGGCCGAGCG CAGCGCCAAC
GCACAGGGCT CGGACTTCAA CCTCTTCCAG ACCACCATCA TGCTGGAGGA GCAGGTGCTC
AGCCGCACCG CGGAACTGGA AGCGGCGCTG CGCGAGAACG AAGAGGTCAA CCGCGTGCTG
CGCAAGACGC AGGCCGACCT GGTGGCCGCA GCGCGCTCGG CCGGCATGGC CGAGATCGCC
ACCAACGTGC TGCACAACGT GGGCAACGTG CTCAACAGCG TCAACGTGTC CGCGGGGCTG
ATTCTTTCCA GGGTTCGCGC GTCCAAGGTG GAAGGACTCG CGCGCGCGGT GCAATTGATG
AACGCGCATG CGGACGACCT GGGCACCTTC CTCGCGTCCG ACGCCAAGGG CAAGCTGCTC
CCGGGCTACC TGATGCAGCT GGCGCCGCTC CTGGTGGCGG AGCAGCGCAC CGTCGTCGAC
GAGCTGGTGG CGCTGGGCAA GAGCGTCGAC CACATCAAGG AAATCATCGC CGCGCAGCAG
GCCCATGCCC GCGCCTCCAG CCTGATCGAG CCGATACGCG TCCACGAACT CGTCGAGGAC
GCGCTGCGCA TGAACGCGTC GGGCGCGGCG CGCTACCAGG TGGTGATCGG GAGCGGCCTC
GTCCGCCTTC CCGAACTGCC GCTGGACCGG GGCCGCCTGC TGCAGGTGCT GATGAACCTC
GTGCGCAATG CCAGGCAGGC GATGGAAGCG GTGGCGGACG ACCGCGCCAA GCTCATGCTC
GATGCGGAGA TCGTCGGGGA CGAGGTGCTG CGCATCCGCG TGGCAGACAC GGGCGTCGGC
ATCGCCCCCG ACAACCTCAC GCGCGTGTTC ATGCACGGGT TCACCACCAG GAAGGACGGC
CACGGCTTCG GCCTGCACAG CGCAGCCATC GCGGCGCGCG AGATGGGCGG CACGCTGGCA
GTCCACAGCG ACGGACCCGG CACCGGCGCC ACCTTCACGC TCGAACTTCC GATCAGAAAG
GCCGCAGAGA CGCCATGA
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| Protein sequence | MRESATLPRP GAQALSSKDE IARLNKIVQA LMDRAERSAN AQGSDFNLFQ TTIMLEEQVL
SRTAELEAAL RENEEVNRVL RKTQADLVAA ARSAGMAEIA TNVLHNVGNV LNSVNVSAGL
ILSRVRASKV EGLARAVQLM NAHADDLGTF LASDAKGKLL PGYLMQLAPL LVAEQRTVVD
ELVALGKSVD HIKEIIAAQQ AHARASSLIE PIRVHELVED ALRMNASGAA RYQVVIGSGL
VRLPELPLDR GRLLQVLMNL VRNARQAMEA VADDRAKLML DAEIVGDEVL RIRVADTGVG
IAPDNLTRVF MHGFTTRKDG HGFGLHSAAI AAREMGGTLA VHSDGPGTGA TFTLELPIRK
AAETP
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