Gene Vapar_6100 details

Gene Information

• Locus tag: Vapar_6100
• ID: 7975546
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012792
• Strand: +
• Start bp: 816293
• End bp: 817018
• Gene Length: 726 bp
• Protein Length: 241 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 644796656
• Product: protein of unknown function DUF1045
• Protein accession: YP_002947930
• Protein GI: 239820745

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGAGG CCGTATTCCG CAGGCACCGC GCGGCGCATC GCTACGCCGC CTATTTCGCG 
CCGGCCATCG ACGGTGCGTG GTGGGAAGCC GGCAGCCACT GGCTCGGACG TTGCGCGGCA 
AGCGGGCAAC TGCTGCCGCA ACCCGCCATC GACGGCCTGC CGCCCGCGCG GCAGCAGGAA 
CTGACGGCCG CGCCGCGGCG CTACGGCTGG CATGCCACGC TGAAGGCGCC GTTTGCCCTG 
CCCTCGCACC TGGACGCGGC GTCGCTGCGC ACCGGCATCC GCCACATCTG CAAGGCCTGG 
GAACCCTTCG ACATGCCGGC GCTGCAGGTG GTGCGGCTCG ACGACTTCCT GGCGCTCGTG 
CCCGCGGCGC CCAGCCGCGC GCTGAACGCC ATGGCGAGTG CCTGCGTGAC CGGCCTGCAC 
GCCTTCGCTG CGCCGCTGCC GCCGGCCGAA TTGCAGCGCC GCCGCGCGAG CGGGCTCACG 
CCCGAGGAAG ATGCGCTGCT GCAGCGCTGG GGCTATCCGT TCGTGCTCGA CCGTTTCCGC 
TTCCACCTCT CGCTGACCGG ATCGCTGCGC GAGGCCGACG AGGCCGAAGT GCATGCCTTG 
CACGAGGCGG CGCAACGGCA CTTCGGCGCG CTGCCCGCGC AACGCTTCGA CGCGATCAGC 
CTGTTCGCGG AGCCCGAGCC GCGCGCGGAC TTCGTGTGCA TCGAACAGAT GGCGCTGGGT 
GCATGA 

 

Protein sequence

MTEAVFRRHR AAHRYAAYFA PAIDGAWWEA GSHWLGRCAA SGQLLPQPAI DGLPPARQQE 
LTAAPRRYGW HATLKAPFAL PSHLDAASLR TGIRHICKAW EPFDMPALQV VRLDDFLALV 
PAAPSRALNA MASACVTGLH AFAAPLPPAE LQRRRASGLT PEEDALLQRW GYPFVLDRFR 
FHLSLTGSLR EADEAEVHAL HEAAQRHFGA LPAQRFDAIS LFAEPEPRAD FVCIEQMALG 
A