| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6094 |
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| Symbol | phnK |
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| ID | 7975540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 811515 |
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| End bp | 812306 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644796650 |
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| Product | phosphonate C-P lyase system protein PhnK |
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| Protein accession | YP_002947924 |
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| Protein GI | 239820739 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4107] ABC-type phosphonate transport system, ATPase component |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.991353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACGA CGCAAGTCTC CTCGCTCCCG CTGCTGCGCG TGCGCGGCGT CGGCAAGCGC
TACGGCGAGC GCGTGGCGCT GCACGACGCC TCCTTCGACC TCTGGCCCGG CGAGGTGCTG
GCGGTGGTCG GCGAATCGGG CTCGGGCAAG TCGACTCTGC TCGACGCCAT TGCCGCGCGC
AGCCGCCCCG ACGCCGGCAG CGTGCAGTTC CACGTGCGCG GCGGCGGCCT GCAGGACGTG
TTCGCGATGA CCGAGGCCCA GCAGCGGCTG CTCTCGCGCA CCGACTGGGG CTTCGTGCAC
CAGAACGCGG CCGACGGCCT GCGCATGGAT GTCTCGGCCG GCGCCAACGT GGGCGAGCGG
CTCATGGGCC TGGGCGAGCG GCACTACGGC CACGTGCGCG CCACCGCGGC CCACTGGCTG
CAGCGCGTGG AGATCGATCC GGCGCGCATC GACGACACGC CGCGCACCTT CTCGGGCGGC
ATGCGCCAGC GCCTGCAGAT CGCGCGCAAC CTGGTCACGC AGCCGCGGCT GGTGTTCATG
GACGAGCCGA CCTCGGGCCT CGATGTGTCG GTGCAGGCCC GCCTGCTCGA CCTGCTGCGC
CAGCTCACGC GGCAGATGCA GCTCGCGGCC ATCGTCGTCA CGCACGACCT GGCGGTGGCG
CGGCTGCTCG CGCACCGCAT GGTCGTGATG CAGCAGGGCC GCGTGGTCGA GACCGGCCTC
ACCGACCAGG TGCTGGACGA CCCGCAGCAC GCCTACACCC AGCTTCTCGT TTCCTCGGTG
CTCCAACCAT GA
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| Protein sequence | MSTTQVSSLP LLRVRGVGKR YGERVALHDA SFDLWPGEVL AVVGESGSGK STLLDAIAAR
SRPDAGSVQF HVRGGGLQDV FAMTEAQQRL LSRTDWGFVH QNAADGLRMD VSAGANVGER
LMGLGERHYG HVRATAAHWL QRVEIDPARI DDTPRTFSGG MRQRLQIARN LVTQPRLVFM
DEPTSGLDVS VQARLLDLLR QLTRQMQLAA IVVTHDLAVA RLLAHRMVVM QQGRVVETGL
TDQVLDDPQH AYTQLLVSSV LQP
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