| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6093 |
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| Symbol | |
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| ID | 7975539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 810802 |
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| End bp | 811518 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644796649 |
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| Product | phosphonate C-P lyase system protein PhnL |
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| Protein accession | YP_002947923 |
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| Protein GI | 239820738 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4778] ABC-type phosphonate transport system, ATPase component |
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| TIGRFAM ID | [TIGR02324] phosphonate C-P lyase system protein PhnL |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACCC CCTTGCTTCT TCTCCAGGGC GTGGCCAAGC GCTTCACGCT GCACCACCAG
AACCAGCTGG AGCTGCCGGT GTTCGACGCG GTCGACCTCC GCGTGAGCGC GGGCGAATGC
GTGGTGCTCG ACGGCGCCTC GGGCCTGGGC AAGAGCACGC TGCTCAAGCT CATCTATGCC
AACTACCGCG CGAGCGCGGG CCGCATCACG GTGCAGGCGC CGGCCGGCCC GGTGGACCTG
ACCGAGGTGG CGCCGCGCGA GCTGGTGCGC CTGCGGCGCG ACACCATCGG CTACGTGAGC
CAGTTCCTGC GCGTGATCCC GCGCGTGCCC GCGCTCGACG TGGTGGCCGA GCCGCTGGCC
GAGGACGCCG GCGACGACCC CGCGGGCATC GAGGCCGCGC GCGCCGAGGC CCGCCTCTGG
CTCGCGCGGC TGCGCATTCC GGAGCGCCTG TGGCACCTGC CGCCCGCCAC CTTCTCGGGC
GGCGAGCAGC AGCGCATCAA CATCGCGCGC AACATGATCA AGCCCAAGCC GCTCTTGCTG
CTGGACGAGC CCACCGCCTC GCTCGACGCC GCCAACACGG CCACGGTGAT CGAGTTGATC
CGCGAGGCCA CGGCACGCGG CGCGGCCATC GTCGGCATCT TCCACGACGC CGAGGTGGGC
GCGGCCGTGG CCACGCGCCG CGTCAACGTG GGCGACTTCA GGAGCACCCG GCCATGA
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| Protein sequence | MTTPLLLLQG VAKRFTLHHQ NQLELPVFDA VDLRVSAGEC VVLDGASGLG KSTLLKLIYA
NYRASAGRIT VQAPAGPVDL TEVAPRELVR LRRDTIGYVS QFLRVIPRVP ALDVVAEPLA
EDAGDDPAGI EAARAEARLW LARLRIPERL WHLPPATFSG GEQQRINIAR NMIKPKPLLL
LDEPTASLDA ANTATVIELI REATARGAAI VGIFHDAEVG AAVATRRVNV GDFRSTRP
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