| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6082 |
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| Symbol | |
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| ID | 7975528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 801283 |
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| End bp | 802284 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644796638 |
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| Product | Alcohol dehydrogenase zinc-binding domain protein |
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| Protein accession | YP_002947912 |
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| Protein GI | 239820727 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCAT TTGTTCTCGA TCGATACGGC AAGAAAGCCG CACTGCGGCC GGCCGACATG
CCGACGCCGG AGCTGCGCGA CGACGAGGTC CTGGTCGAGG TGCATGCCGC GGGCCTGAAC
CTGCTGGACG CCAAGATCAG GAACGGCGAG TTCAAGCTCA TCCTGCCGTA CCGCCTGCCC
CTCGTGCTGG GGCATGACGT GGCCGGCGTC GTGGCCAAGG TCGGCGCGCG CGTGCGGCAG
TTCAAGCCGG GCGACGAGGT CTATGCGCGG GCCGACGATT TCCGGATCGG CACCTTCGCC
GAGTTTGTTG CGGTCAAGGA GGCATCGCTC GCGCCCAAGC CGCAGGGCCT CACGATGGAA
GAAGCCGCGT CCATTCCGCT GGTGGCCCTG ACGGTGTGGC AGGCACTGGT CGAGAAGGCG
GGGCTCAAGA AGGGCCAGAA GGTCTTCATC CAGGCGGGCT CCGGCGGCGT GGGCACCTTG
GCCATCCAGC TGGCCAAGCA CCTGGGCGCC ACCGTCGCCA CCACGACGAG CGCGGCCAAT
GCCGCGCTGG TGAAGAGCCT GGGCGCGGAC GTCGTCATCG ACTACCGCAC GCAGGACTTC
GAGGATGTGC TGCGCGACTA CGACGTGGTC CTGAACAGCC AGGACGGCAA GACGCTCGAG
AAGTCCCTGC GCGTGCTCAA GCGCGGCGGC AAGCTCATCT CCATCTCCGG ACCGCCCGAC
CCGGCATTCG CCAAGCAGAG CGGCGCGCCT GGTTTCGTGA AGCTGGCCAT GCGGCTTTTG
AGTTCGGGCA TCAGGCGCCG GGCCGGAAAC CGCGGCGTCG ATTACTCGTT CCTCTTCATG
AGGGCGAACG GTACCCAGCT GCGCGAGATC ACGCGCTTGA TCGAGGCCGG TGCCATCCGG
CCCGTGATGG ACCGCGTGTT CCCGTTCGAA TCCACCAACG AAGCCCTGGC CTATGTCGAA
GCGGGCCGCG CCAAGGGCAA GGTCGTCGTC AAGCTCAAGT GA
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| Protein sequence | MKAFVLDRYG KKAALRPADM PTPELRDDEV LVEVHAAGLN LLDAKIRNGE FKLILPYRLP
LVLGHDVAGV VAKVGARVRQ FKPGDEVYAR ADDFRIGTFA EFVAVKEASL APKPQGLTME
EAASIPLVAL TVWQALVEKA GLKKGQKVFI QAGSGGVGTL AIQLAKHLGA TVATTTSAAN
AALVKSLGAD VVIDYRTQDF EDVLRDYDVV LNSQDGKTLE KSLRVLKRGG KLISISGPPD
PAFAKQSGAP GFVKLAMRLL SSGIRRRAGN RGVDYSFLFM RANGTQLREI TRLIEAGAIR
PVMDRVFPFE STNEALAYVE AGRAKGKVVV KLK
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