Gene Vapar_6077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_6077 
Symbol 
ID7975523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand+ 
Start bp797463 
End bp798071 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content70% 
IMG OID644796633 
Productprotein of unknown function UPF0126 
Protein accessionYP_002947907 
Protein GI239820722 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCTGT ATGTGCTCGA TCTCGCAGGC ATCGCGGTCT TCGCAATCAG CGGCGTGCTG 
GCGGCGGGCC GTGCGGACCT CGACTGGCTG GGCGTGGTGG TGATCGCCTC CGTCACGGCC 
GTGGGCGGCG GCACATTACG CGACCTGCTG CTGGACCGCC ATCCGGTGTT CTGGATCCGC 
GAAGTGCGCT ATGTGTACGC GATCCTGGCG GCGACAGCGG CCGCCATCGC ATGGGTTCAT 
TTCTTCCCGC TGCCCGAGCA CGCGCTGGCC TTGGCCGATG CGCTGGGCCT CGCGCTCTTT 
GCGATGACCG GGGCGCAGGT GGCCGAGGAG CGGCGCCTGC CGGCGCTCGT CGTGATCCTG 
ATCGGCACCA TGACCGGCGC CGCCGGCGGC CTGTTGCGCG ATGTGCTCAC CGACCGCATT 
CCGCTGCTGC TGAGCAGCGG CATCTATGGT TCCGCTGCCA TCGCGGGCAT TGCGGCCTAC 
CTGCTGCTGC AGGCCGCCGG AATGCCGCGC CACTGGGCCT TTCACGCGGG GCTGCTGCTG 
GTGGTGGCGC TCCGGCTCGG CGGGATCTAC GGCGGCTGGC ACCTGCCGGT GCTGCGGCTT 
TCGGCTTGA
 
Protein sequence
MLLYVLDLAG IAVFAISGVL AAGRADLDWL GVVVIASVTA VGGGTLRDLL LDRHPVFWIR 
EVRYVYAILA ATAAAIAWVH FFPLPEHALA LADALGLALF AMTGAQVAEE RRLPALVVIL 
IGTMTGAAGG LLRDVLTDRI PLLLSSGIYG SAAIAGIAAY LLLQAAGMPR HWAFHAGLLL 
VVALRLGGIY GGWHLPVLRL SA