| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6072 |
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| Symbol | |
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| ID | 7975518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 792793 |
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| End bp | 793728 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644796629 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002947903 |
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| Protein GI | 239820718 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGATT CGAGTTCCTT ATCAACGCGG TTCACCCTCC ACCAGCTGGA AGCTTTCGTG
TGGACCGCGC GTCTCGGCAC GGTGCATGCA GCAGCGCGCC ACCTGCATCT GACCCAGCCG
GCGATCTCGC ACCGCATTCG CGACCTGGAG GAGGAACTGG GTATCCAGCT GTTCGAACGC
CAGAGCCAGC GCCTGCTGGT GACAGAGCTG GGCCGCAACG TGCTGGTCTA TGCGGAGCGC
GTGCTGGCGT CGGCGCAGGA CATGGCGAGG CTCGATCTGC GGCGCACCAT CACCGGCCTG
GTGCGCCTGG GAGTGGACGA GTCCTGCGCG ATCATCGGGA TGCCGCAGAT CCTCAAGGAG
ATCAAGGACA GCTATCCGGC GCTCCGCGTG GACCTGACGG TGGGCGGAGG CGCCCAACTG
CTTCAGAAGA TCAACAGCCA CGAGTTGGAC ATAGCGCTGC ACACGGGGCA AAGCAGCCAG
CCCGACGTGA CAAGCCAGTT CATCGGACTG ACCGAACACC AGTGGGTGGC GGCCCACGAC
CTGATGATGC CCGACGGAGA CTTTCTGCCG GCCCACGCCC TGAACCACCG CATCGTCTGC
AATGCGCCGC CGTCGACCCT GCATGAATCG GCATCGCGCT GGCTGGCCTC GGATGGCTAT
TCGTTCGAGG AGTACAGCAG TTGCAATTCG CTCTCGCTCA TGGTGGCGCT GGTCGCCTCC
GGCCATGCGA TTGCCATGCT GCCCGCATCG ATCACGCGCC GGCAGGTCGC CGAAAAGTCC
CTGCAGGTGT TGCGCGCCAA GCCGGCGGTG CCGAACGTGC CCTACTACTT CTCGTACCTG
GCGCATCACC GCAGCGACAT GACGGCACGC ATCCTGGACA TCGTGCTGCG CAACTTGCAC
TACGCCGGGT TCTTCCAAGC TGAAGGATCG TCCTAG
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| Protein sequence | MVDSSSLSTR FTLHQLEAFV WTARLGTVHA AARHLHLTQP AISHRIRDLE EELGIQLFER
QSQRLLVTEL GRNVLVYAER VLASAQDMAR LDLRRTITGL VRLGVDESCA IIGMPQILKE
IKDSYPALRV DLTVGGGAQL LQKINSHELD IALHTGQSSQ PDVTSQFIGL TEHQWVAAHD
LMMPDGDFLP AHALNHRIVC NAPPSTLHES ASRWLASDGY SFEEYSSCNS LSLMVALVAS
GHAIAMLPAS ITRRQVAEKS LQVLRAKPAV PNVPYYFSYL AHHRSDMTAR ILDIVLRNLH
YAGFFQAEGS S
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