| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6070 |
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| Symbol | |
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| ID | 7975516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 790677 |
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| End bp | 792053 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796627 |
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| Product | Amidase |
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| Protein accession | YP_002947901 |
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| Protein GI | 239820716 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAGCG CTCATCAGAC CAGGCCGCCC GCCTTCGCAC CGATGGCGGA ACTGTCGCGT
GCCTTGCGAA CCGGAGAGAC CAGTTCGGTG ATCCTCACGC GGGAGTGCCT TCGCCGCATC
GCAGCGCACG ACGCTGTCTT CAAGAGCTTC CTGGCGGTCT ACGAAGAAGA GGCCCTGGCG
GCGGCGGCCC TCGCCGACGA GGAGCTTCGC GCAGGCCACG ACCGCGGCCC GCTGCACGGT
ATTCCGTTGG CGCTGAAGGA CCTGGTGAAC ATCCAGGGCA AGCCCACGAC GGCAGGCTCA
CCGCTGCTGT CGGCCAACAT CGCGCAACAG GACGCAGCCA TCGTTCGGCG CATTGCCGAC
GCCGGCGGCG TCATCGTCGG CAAGACCCAC ATGGTGCAGT TCGCGCTGGG CGCCTGGGGC
ACCAATACGC ACATGGGCAC GCCACGCAAT CCGGCCGGCC GCGCCACCGA CATGCTGGTG
GCAGGCGGCT CCAGCAGCGG ATCGGCCGTG GCCGTCGCAG CCCACCTGGT GCCGTGGGCG
ATCGGTTCCG ATACCGGCGG CTCGGTTCGC GTACCCGCGG CCTTCTGCGG CATCGTGGGC
TTCAAGCCCA CCATCGATGC GCTGCCGCGC GAGGGCGTCT ATGCGCTCAG CGAGAGCCTG
GACAGCGTGG GCCTGCTTGC GTCGTCGGTG CAGGATGCCC GGTTGTGCTT CGAGGCGCTC
GCCGACGCGC CCGGTTCGGG CGCGGACGCC CGCCGGCGGA TCGGCGTCCT GGAGGCGGAC
GAACTCGCGC CACTCGCACC GGCCGTCGCG CGATGCCAGG TACAGTGCCT GCAAAGACTC
GAGCAGGCGG GTTTCAGCCT GGTGCCGTTC CGGTTTCCGG CGTCGCTGGC GGCGTTCAAG
GAACCCACCA ATGCCATCAT GATCGCCGAA GGCGCCTGGG TGAATGACCG GTTCCTGGAC
GACCCCGACG CACCGATGGA TCCGTCGGTG CGGTCGCGGC TTGTCGCCGC CCGGGCGACC
ACGGCCGTGC AGTACCTGCA GGCCCAAGCC ACCGCGTCGC GCTGGCAGCA GGAGTTCGCC
GGCGACATGG ACAGGCTCGG GCTGTCCGCC ATCGCCATGC CGGTGACGGC GATGACCGCG
CCGCGCCTCG AGGACGTCGA CCACGACGTG GCGCCGGTCC ACTTCACCCG CCCGGTCAAC
CTGCTCGCGC TGTGCGGTAT CTCGCTTCCC GCGGGTGAGG ACGACGACGC ACGGCCCATC
GGGCTGCAAC TGGTCGGGCG CGCGGGATGC GATCACGCAC TGCTGGGTGT CGCTGCCGAT
GTCGCCGCCG CACTGCATCC GTCTCGAATT CCGTCGCAGG AGGTGCGCAA TGCTTAG
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| Protein sequence | MTSAHQTRPP AFAPMAELSR ALRTGETSSV ILTRECLRRI AAHDAVFKSF LAVYEEEALA
AAALADEELR AGHDRGPLHG IPLALKDLVN IQGKPTTAGS PLLSANIAQQ DAAIVRRIAD
AGGVIVGKTH MVQFALGAWG TNTHMGTPRN PAGRATDMLV AGGSSSGSAV AVAAHLVPWA
IGSDTGGSVR VPAAFCGIVG FKPTIDALPR EGVYALSESL DSVGLLASSV QDARLCFEAL
ADAPGSGADA RRRIGVLEAD ELAPLAPAVA RCQVQCLQRL EQAGFSLVPF RFPASLAAFK
EPTNAIMIAE GAWVNDRFLD DPDAPMDPSV RSRLVAARAT TAVQYLQAQA TASRWQQEFA
GDMDRLGLSA IAMPVTAMTA PRLEDVDHDV APVHFTRPVN LLALCGISLP AGEDDDARPI
GLQLVGRAGC DHALLGVAAD VAAALHPSRI PSQEVRNA
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