| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6068 |
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| Symbol | |
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| ID | 7975514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 788699 |
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| End bp | 789673 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644796625 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947899 |
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| Protein GI | 239820714 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTG CCTTGATACG TGCGGCGTGT GCCCTCTCAC TGGCGATGGC AGGGCCGGCG
TTCGCAGGGG ACTACCCGGA CAAGCCCATC CGCATCGTGG TTCCCTATCC GCCGGGCGGC
GCGTCCGACA CGGTGTCGCG CCTGATCGGG CAGCAGCTGT CGCAGCGACT CAAGCAGCCC
GTGGTCGTCG AGAACAAGCC GGGTGCCACC GAACAGATCG CGGCCAGCTT CGTCGCCAAG
GCGAACCCGG ACGGCTACAC GATCCTGCTG GCCTCCACCG CGGGACTTTC GGTCAATCCG
ACCCTCTACA AGGGACGCCT CGCCTACGAC CCGGAAAAGG ACCTCGCGCC GATCGTGCTG
GCCGTGACCC TGCCCAGCGT GGTCATGGTT CATCCTTCGA TGCCGGTCAA TTCGTTCGAC
GAGCTCACGG CGTTCGCGCG GTCTTCGGCG ACACCGATCA ACTACGCTTC CAGCGGCGCC
GGCAACCCCA GCCACCTGGG CATGGAGCTG TACAAGCGCG CGGCGTCCAT CGACATGACG
CATGTGCCCT ACAAGGGTGG CGCGCCCGCG CTCCAGGATC TGATGTCCGG CCAGGTGTCC
GTGATGATGG CCATCGGCCC GGAGTCGATG CCGATGGCCA AGGCCGGCCG GATGAAGGCG
CTTGCAGTGA CGACAGCGAA ACGCTCGCCC GCCTATCCCG GACTGCCCGC AGTCTCCGAG
ACCAAGGGCT TTGCCAACTT CGAGCTGCTG CACTGGTTTG CACTGCTGGC ACCCGCCCGG
ACGCCCGACG CCGTCATTGC GCTGCTGAAC AAGAACGTGA ACGACATCCT GAAGGACCCG
GAGGTGAAGA ACAAGCTGCT TGAAATGGGA ATGGAGCTCG AAGGCGGCTC GCCGCAGCGA
TTGGCCGAAA CGATCAAGCG GGACCGCCTC AAGTGGGAGA AGGTGATCAT CGAATCGAAC
ATCCGGATCG ATTGA
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| Protein sequence | MKIALIRAAC ALSLAMAGPA FAGDYPDKPI RIVVPYPPGG ASDTVSRLIG QQLSQRLKQP
VVVENKPGAT EQIAASFVAK ANPDGYTILL ASTAGLSVNP TLYKGRLAYD PEKDLAPIVL
AVTLPSVVMV HPSMPVNSFD ELTAFARSSA TPINYASSGA GNPSHLGMEL YKRAASIDMT
HVPYKGGAPA LQDLMSGQVS VMMAIGPESM PMAKAGRMKA LAVTTAKRSP AYPGLPAVSE
TKGFANFELL HWFALLAPAR TPDAVIALLN KNVNDILKDP EVKNKLLEMG MELEGGSPQR
LAETIKRDRL KWEKVIIESN IRID
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