| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6056 |
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| Symbol | |
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| ID | 7975341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 777334 |
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| End bp | 778371 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644796615 |
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| Product | cobalamin synthesis protein P47K |
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| Protein accession | YP_002947889 |
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| Protein GI | 239820704 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0523] Putative GTPases (G3E family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.268989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGCC TCGGTTCGAA AGACGACGGC CGCGTGCCCA TCCATGTGTT GACGGGCTTC
CTTGGCAGTG GTAAGACAAC CCTGCTGCGC CATTTGCTGG CCGACAACCA TCTGGCAGAC
ACCGCGGTGG TCATCAACGA ATTCGGGGAA GTCGGCCTGG ACCATCTGCT GGTGCGCGAA
GTCGCCGAAG ACGTCGTGCT TCTCAGCTCG GGCTGCCTGT GCTGCTCCGT GCGCGACGAC
CTGGTGTCTA CGCTGGCCGA GCTGCATGGG CTGATGCGAG TCGGCGAGAT TCCGGCCTTC
GCTCGCGTGG TCGTCGAGAC CACCGGGCTG GCCGATCCCG CGCCGATCAT GCAAGCCATC
CTGAGCGAGC AGAGCCTGGT CCCCTGGTTC CGGATGGGCC AGGTGATCAC GACTGCCGAT
GCCGTGAATG CGGAGCAGAC CTTGACTCGC CATCGCGAAG CCAGGCAGCA GCTCGCTTGC
GCCGATAGGG TGATCCTGAC CAAGGCCGAC CTGATCGACG AATCCGATTG CACCGTGCTG
TTGGACAAGC TCCGGGCAAG GAATCCGTCG GCCAGCCTGA AGATCTCGCG CAAGGAACAG
CTGCCCGCAG CCGAGATATT GGAAGCGATC GATGCCCAAT GGCGCCGTTC GGTCGTCCCT
GCGCAGCTCG CGTCGGACGA CGATCCGCTG CGAATGCCGG CGATTCCCCA TGCGCCCGGA
CACGACGAAG CGATCAAGAC TTTCACGGTG CGGCTGCCAC AGCCGGTCGA ATGGGCACAC
TTCGTCGACT GGCTGGAGCT GCTGCTCGCA AGCCGGGGCG ATGCGGTCCT GCGAGTCAAG
GGATTGCTGT CAGTCAGCGA CGATGAGCGA CCCGTGGTCG TGCAAGGCGT CCAGCACGTG
CTCTATCCGA TCGAACGGCT GCCGGCATGG CCGGACGAAT CGGCCCGGCC CGGCTGGATC
GTTTTCATTG CGCGCGACCT GACGCAGCGT GCAATCGAAA ACTCACTGCG CAGCGTCTAC
GAGCACAGCC TGGTATGA
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| Protein sequence | MNRLGSKDDG RVPIHVLTGF LGSGKTTLLR HLLADNHLAD TAVVINEFGE VGLDHLLVRE
VAEDVVLLSS GCLCCSVRDD LVSTLAELHG LMRVGEIPAF ARVVVETTGL ADPAPIMQAI
LSEQSLVPWF RMGQVITTAD AVNAEQTLTR HREARQQLAC ADRVILTKAD LIDESDCTVL
LDKLRARNPS ASLKISRKEQ LPAAEILEAI DAQWRRSVVP AQLASDDDPL RMPAIPHAPG
HDEAIKTFTV RLPQPVEWAH FVDWLELLLA SRGDAVLRVK GLLSVSDDER PVVVQGVQHV
LYPIERLPAW PDESARPGWI VFIARDLTQR AIENSLRSVY EHSLV
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