| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6055 |
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| Symbol | |
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| ID | 7975340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 776844 |
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| End bp | 777332 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644796614 |
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| Product | Endoribonuclease L-PSP |
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| Protein accession | YP_002947888 |
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| Protein GI | 239820703 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.316335 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGCT TGAACAGCAT GACACAGCCA GGACATGACT TGCGCCTCGA ACAACTCGGC
ATCGAGTTGC CAAAGGCGGT TGCTCCTGCA GCGAACTACG TGCCGGCGCG CAAGAGCGGC
TCCTTCGTCT ACATAGCGGG ACAGGTTCCG ACCGCCGACG GCAAGGACCG GTACGTCGGC
AAGGTCGGCA AGGACGTGTC GATCGAAGAG GCCCAGAAAG CCGCCCGGCT GTGCGCCATC
AACATCCTGG CCCAGCTGCG CACTGCGCTG GGCGGAAGCC TCGACAGCGT GGTCGGTTGC
ATTCGCCTGG GCGGTTTCGT CAACGCTACG CCCGAGTTCG GCGACCACCC AAAGGTGATC
AACGGCGCGT CCGACCTGAT GGTCGAAGTA TTCGGCGACG CAGGGCGACA TGCCCGCGCG
GCGGTGGGCT GCAACTCGCT GCCGCGCAAC GTGGCCGTCG AAGTGGATGC CATTTTCGAG
ATCGGCTGA
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| Protein sequence | MKGLNSMTQP GHDLRLEQLG IELPKAVAPA ANYVPARKSG SFVYIAGQVP TADGKDRYVG
KVGKDVSIEE AQKAARLCAI NILAQLRTAL GGSLDSVVGC IRLGGFVNAT PEFGDHPKVI
NGASDLMVEV FGDAGRHARA AVGCNSLPRN VAVEVDAIFE IG
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