| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6054 |
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| Symbol | |
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| ID | 7975339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 776084 |
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| End bp | 776830 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644796613 |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_002947887 |
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| Protein GI | 239820702 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.149072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGAGA CCGTCGAACG CCCGCAACGC GAGGCCACCG CAGAACCCAG CAAACGGGCT
CGCGGCAGCG TCCCCGAGGA AGTCTTTCAG CGCCTGCGGC GAGGGCTGAT GGTGGGCGCC
TTCGTCCCAG GCCAGGTGAT GAGCCTGCGC AAGTTGGCGA GCAGCTTCGG CACCAGCGCA
ATGCCGATCC GCGAAGCGCT CACGCGACTG GTGGTGATCA ACGCACTGGA GGACACGTCG
TCCGGATCGG TCCGCGTGCC GCACCTGACC CCCAAGAAGC TCAACGAACT ATTCGCTGTT
CGCGAGATGA TCGAAGGGGA GGCCACCGAG ATGGCCTGCC GCAATTGCAC GCCCTCCCTG
CTGGCCAATC TGCATGCCGT CAACGAGGAA TTGCTCGAGG CGATCGCCAA GCGCAATCTG
ATCGGCTGCC TTTCGTCGAA CCAGCGCTTT CACTTCACGC TGTACCAGGC GTCGGGGACC
GAAGTGTTCA TGCCGCTGAT CGAGTCGCTT TGGCTGCAGT TCGGACCCAC CATGTACCTG
TCGCTGCTGT CGCCCGACAT GCCATGGGAC GCCTCCGCAC ACGTCGAGAT ACTCGAAGGG
CTGAAGGCAA AGAAGCCCGC CGTCGCCAAG CGTGGCGTGC TGCGCGACAT CCGCAACACG
GCCTTGTCGC TCGCACCCGC ACTCGGTGCC CAGCAGACCT CCGACCTCCT GACGGCCCCG
CTCGACGATC TCTACTTCGG CAGCTGA
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| Protein sequence | MQETVERPQR EATAEPSKRA RGSVPEEVFQ RLRRGLMVGA FVPGQVMSLR KLASSFGTSA
MPIREALTRL VVINALEDTS SGSVRVPHLT PKKLNELFAV REMIEGEATE MACRNCTPSL
LANLHAVNEE LLEAIAKRNL IGCLSSNQRF HFTLYQASGT EVFMPLIESL WLQFGPTMYL
SLLSPDMPWD ASAHVEILEG LKAKKPAVAK RGVLRDIRNT ALSLAPALGA QQTSDLLTAP
LDDLYFGS
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