| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6053 |
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| Symbol | |
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| ID | 7975338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 774896 |
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| End bp | 775867 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644796612 |
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| Product | NMT1/THI5 like domain protein |
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| Protein accession | YP_002947886 |
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| Protein GI | 239820701 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.184042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTGCA GGCTCAGGGC GGGCGCCTTG GTTGCAGCGT TCGCGTTGGC TTCGTCGGCG
TGGGCCGCCG ATGAGGTCAA GGTTCGATTC AGCTGGAAGC TCAAGGGCGA ATATGCCCAT
CTCTATCTGG CACAGGAAAA GGGCCTGTAC GCCTCGAAGG ATCTGGTGGT GCGGATGGGC
GAGGGCGCCG GTGCCCCGGC GGCATTGGGC GCATTGCTGC AGGGGCAGGA AGACGTGGTT
GTGATGCCTG CGATTTTTGC AGCTTCCGCC ATCCAGAAGG GCATGCCGGT CAAGATCATT
GCGCTCTACC AGCCGAAGAC CCCGGTGGTG CTGATCTCGC AGATCGACAA GCCGGTGTTG
AAGCCGAAGG ATCTCGAAGG CAAGTCAATC GCGCATTCCG TGGGCGAGAC GGGCACCTCG
TACCTTTCGG TTTTCTGCGC GGTGAACCAG ATCGATTGCA GCAAGGTCAA GAAAGTGCAG
ATGGACGCGC AGTCGCGCGT GCCGCAGTTC CTGCAAAAGC AGGTCGACGT GGTCAGCCTC
TACAAGAACA ACGACCTGCC GGTGATCGAA GCACGTGTGG GCACCAAGTT TCCAATGCTC
GACCTGGCGC AGTACGGCCT GGCGATCCCT GGTCTGGCCG CGGTCTCCAG CAACGCCCTG
ATCGCAAAGA AGCCGGACGT CCTCAAGCGC TACCTGGCAG CGGTCAACGA AGGTATCGAC
GCCACGCGCA AGGACCCGAA GGCCGCCACC GCCGCCATCG CCAAGGCCTG GCAGGGCGGG
CCATCGGCCG ATGTAATCGA AGCGCAGGTG CGAGCCACGA TGGAAGCCAT CGAGACCCAG
TCCGGCAAGC CCACGGGCTG GACCGACCCG AAAACCATCG TCCAGGCGCT CGAGTTACTG
AAGACCGATG AATCCATCGG AACGCCCAAG CCGACCGAAA CCTTCTTCAC CAACGATCTG
CTGGCGCAGT GA
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| Protein sequence | MTCRLRAGAL VAAFALASSA WAADEVKVRF SWKLKGEYAH LYLAQEKGLY ASKDLVVRMG
EGAGAPAALG ALLQGQEDVV VMPAIFAASA IQKGMPVKII ALYQPKTPVV LISQIDKPVL
KPKDLEGKSI AHSVGETGTS YLSVFCAVNQ IDCSKVKKVQ MDAQSRVPQF LQKQVDVVSL
YKNNDLPVIE ARVGTKFPML DLAQYGLAIP GLAAVSSNAL IAKKPDVLKR YLAAVNEGID
ATRKDPKAAT AAIAKAWQGG PSADVIEAQV RATMEAIETQ SGKPTGWTDP KTIVQALELL
KTDESIGTPK PTETFFTNDL LAQ
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