| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6050 |
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| Symbol | |
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| ID | 7975335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 772132 |
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| End bp | 773220 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796609 |
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| Product | NAD/NADP octopine/nopaline dehydrogenase |
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| Protein accession | YP_002947883 |
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| Protein GI | 239820698 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1893] Ketopantoate reductase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.492229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATAT CGATATTGGG TGCGGGCGCC GGAGGTGCTG CGGCTGTGGC CGAGCTCACG
CAGGCCGGCC ACGAAGTCGT GCTGTGGAAC CGGTCCGCCG AAACGTTGGC GCCGTTCCAA
GCCTTGGGCG GTGTGCGCTA TGCCGGCGTG CTAGGCGAGG GCATCGCGCG GCCCCGACTG
ATTACTGCGA ACCTGGCCGA AGCCGTACGG GGCGCCGACG CCGCGGTGGT GACGCTCCCG
ACCTTTTCGC ATGCGCCCGT GGCGCGCGCG CTCGCCGACG CGGGCTGGCC GGCCGACCGG
CCGGTGGTGC TGAATCCTGG TCACACCGGC GGCGCACTGG ACTTCGCCCA CGCCTATCGC
AGCGTGCGTG CCGACCTGCC GCCGATCGCC GAGTTCTCGA CGTTGACTTA CGTCGCGCGC
AAATACCAGC CCGACAGCGT CACCGTGTCC GGCCGTGCCA AGCAGGTGCG GGCGGCGGCA
CTGCCGGGTG GCGACGCCGC GTTGCGGACG GCGTGCACCT TGTTTCCCGG GGCGTCACCT
GTCGCGGACG TGCTGGCATC GGCGCTGGCG AATGCCAATT TGGTGCTGCA TCCGCCCGGC
GCCGTTCTGG CCGCGGCGTG GGTGGAAGCC ACGCAGGGCG ACTTCACCTT CTACGTGCAG
GCCATGACGG CCGGCGTGGC GCGCACCATG CGCGCGTTGG ACGACGAGCG GCTCGCGGTG
GCCGCCGCCT TCGGTCATCG GTTGCCCAAT CTTGTGGAGG AGATGAAGCT CATCGGCACC
GTCGAGCCCT CGGTCACCGA CACCCAAGAT TTCGTGGCCG CGATTGCGGG TGGCGAGGCC
AACAAGCGCA TCAAGGGGCC GGACTCGCTG CAGCACCGCT ACTACCGCGA GGACTTCGGC
CACGGCCTGT TGCCCTTCCT TGAGCTCGCG GCCATTGCTG GCGTTGCCAC GCCGGTCGCG
CAGTCGCTGT TCACGCTGGC GCAAACGCTG ATTGGTATTG ATTACCGCCA GGGTGGCCGC
AGCGCCGAGG CGATGGGCAT TGCCGGCCTT TCCAGATCCG AACTTATTCA ACGTGTGAGG
CCATCATGA
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| Protein sequence | MKISILGAGA GGAAAVAELT QAGHEVVLWN RSAETLAPFQ ALGGVRYAGV LGEGIARPRL
ITANLAEAVR GADAAVVTLP TFSHAPVARA LADAGWPADR PVVLNPGHTG GALDFAHAYR
SVRADLPPIA EFSTLTYVAR KYQPDSVTVS GRAKQVRAAA LPGGDAALRT ACTLFPGASP
VADVLASALA NANLVLHPPG AVLAAAWVEA TQGDFTFYVQ AMTAGVARTM RALDDERLAV
AAAFGHRLPN LVEEMKLIGT VEPSVTDTQD FVAAIAGGEA NKRIKGPDSL QHRYYREDFG
HGLLPFLELA AIAGVATPVA QSLFTLAQTL IGIDYRQGGR SAEAMGIAGL SRSELIQRVR
PS
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