Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_6044 |
Symbol | |
ID | 7975329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | - |
Start bp | 766807 |
End bp | 767937 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644796603 |
Product | NAD(P)(+) transhydrogenase (AB-specific) |
Protein accession | YP_002947877 |
Protein GI | 239820692 |
COG category | [C] Energy production and conversion |
COG ID | [COG3288] NAD/NADP transhydrogenase alpha subunit |
TIGRFAM ID | [TIGR00561] NAD(P) transhydrogenase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.660089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGATAG GCGTGCCTGC CGAGACAATG GCCGGCGAAA CCCGCGTGGC CGTAACGCCC GAGACGGTGA AGAAACTGGC CGCTTCCGGG CACACCGTGC GCGTGCAGTC CGGGGCTGGC ATTGCCGCCA GCGTCACCGA TGCCGCCTAC GAGGCCGCCG GTGCCGAGAT CGTCAACATG AACGCCGCCT TCGCGGCCGA CATGGTGCTC AAGGTGCGCA CCCCCAGCGA TGCCGAAACC GCGCTCATGA AGCCCGGTAC CGTGGTCATC GGCATGCTCA ACCCCTTCGA TGCGGCCGGC CTGCAGCGCC TGGCCACGGC CGGCCTCACG GCCTTCGCGC TCGAAGCCGC GCCGCGCACC ACCCGCGCCC AGAGCATGGA CGTGCTCTCC TCGCAGGCCA ACATCGCGGG CTACAAGGCC GTGATCATCG CGGCCGACAA GTACCAGCGC TTCTTCCCGA TGCTCATGAC CGCCGCCGGC ACCGTGAAGG CCGCGCGCGT GGTCATCCTG GGCGTCGGCG TGGCCGGCCT GCAGGCCATC GCCACCGCCA AGCGCCTGGG CGCCGTGATC GAGGCTTCGG ATGTGCGCCC GAGCGTCAAG GAGCAGATCG AATCGCTCGG CGGCAAGTTC ATCGAGGTGT CCTATGACAC CGACGAGGAG AAGGAAGCCG CGGTCGGCGT CGGCGGCTAT GCCAAGCCCA TGCCCGCGAG CTGGCTCGCG CGCCAGCAGG TCGAAGTGGC CAAGCGCGTG GCGCTGGCCG ACATCGTCAT CAGCACCGCG CTCATCCCCG GCCGCGCCGC GCCCACGCTC ATCACCGAGG ACATGGTCAA GGCCATGAAG CCGGGCTCGG TGATCGTCGA CATCGCGGCC GGCAAGGGCG CGGACGGCAT CGGCGGCAAC TGCCCCTTGT CGGAAGCCGA CAAGACGGTG GTCAAGCACG GCGTGACCAT CGTCGGCGAA ACCAACCTGC CGGCGCTGGT GGCGGCCGAC GCGTCGGCGC TCTATGCGCG CAACGTGCTC GACTTCCTCA AGCTCATCGT CACCAAGGAG GGCGGCCTGA AGATCGACCT CGAGGACGAC ATCGTCGCCG CCTGCCGCGT TGCGCAGGAC GGCCAGGTCA CGAAGAAATA A
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Protein sequence | MLIGVPAETM AGETRVAVTP ETVKKLAASG HTVRVQSGAG IAASVTDAAY EAAGAEIVNM NAAFAADMVL KVRTPSDAET ALMKPGTVVI GMLNPFDAAG LQRLATAGLT AFALEAAPRT TRAQSMDVLS SQANIAGYKA VIIAADKYQR FFPMLMTAAG TVKAARVVIL GVGVAGLQAI ATAKRLGAVI EASDVRPSVK EQIESLGGKF IEVSYDTDEE KEAAVGVGGY AKPMPASWLA RQQVEVAKRV ALADIVISTA LIPGRAAPTL ITEDMVKAMK PGSVIVDIAA GKGADGIGGN CPLSEADKTV VKHGVTIVGE TNLPALVAAD ASALYARNVL DFLKLIVTKE GGLKIDLEDD IVAACRVAQD GQVTKK
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