Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_6030 |
Symbol | |
ID | 7975315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | - |
Start bp | 754487 |
End bp | 755542 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644796590 |
Product | hypothetical protein |
Protein accession | YP_002947864 |
Protein GI | 239820679 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.053883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGGCG TCATTGCCAT CAATTCGCTG ATCGAGTTCA AGGAGACAAA GATGGTGTTC CACAAAGACA AGAGATTCGT CCTGCGTCTC GCGCTTGCCT GCGCGCTGCT TCCCGCCTTC GGCGGCGCGC AGGCGCAGTC TGCGCCGGCG GCTGCGTATC CGTCCAAGCC GATCAAGTTC ATCGTGCCGG TGCCGGCCGG CGGCGCCGCC GACGCCATGG CCCGCATGAT CGCCACGCAC CTGCAGACCG CGTGGGGCCA GGCCGTGGTG GTCGACAACA AGCCCGGCGC CGGTTCGAGC GTGGGGATGG CGGTGGTTGC CAAGGCCGCG CCGGACGGCT ACACCATCGG CATGGGCAAT GTCGCGGCCA ACGCCATCAA CCCCGCCGTG CGGCCCGAGG CCTTCCCCTA CGATCCGGTG AAGGACTTCG CCGCGGTCAC CATGGTGGGC ATCACGCCGC TGATCCTGGT GGTGAATCCG CAGAAGGTGC CGGCGCGCAC GCTGCCCGAG TTCCTCGCGT ACCTCAAGGC GCACCCGGGG CAGCTCAGCT ATGGCTCTTC CGGCGCAGGC TCGGCGCTGC ACGTGGGCAT GGAACTCTTC CTGCAGAAAA CCGGCACCTC GATGGTCCAT GTCGGCTACA AGGGCTCGGC GCCCATGCTG ACCGACCTGC TCGGCGGACA GGTCGATGCC GCCATGGATG CGGCCGCCAC CTCCTGGCCG CAGGTGCAAT CGGGCAAGCT GCGCGCGCTG GGCGTCTCGA CGGCGCAGCG GGTGTTCTTC GCGCCCGAGC TGCCGCCCAT CGCCGAGTCC GTGAAGGGCT TCGAGATGAA TCCCTGGCAC GGCGTCATGG CGCCGGCCGG CACGCCGCCC GCCATCGTCG ACAAGCTCGC GGCCGAGATC CAGGCGTTCC TGCGCCTGCC CGACACCGAA GCCAAGCTGC GCGAGCGCGG CGTGGTGCGC GTGGGCTCGA GTCCCGCGGA GTTCGCGAAG AGCCTGCGCG ATGAAGCGGC CTTCTACAAG AAGCTCGCAG CCGACGCGGG CATCAAGGCC GAATGA
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Protein sequence | MNGVIAINSL IEFKETKMVF HKDKRFVLRL ALACALLPAF GGAQAQSAPA AAYPSKPIKF IVPVPAGGAA DAMARMIATH LQTAWGQAVV VDNKPGAGSS VGMAVVAKAA PDGYTIGMGN VAANAINPAV RPEAFPYDPV KDFAAVTMVG ITPLILVVNP QKVPARTLPE FLAYLKAHPG QLSYGSSGAG SALHVGMELF LQKTGTSMVH VGYKGSAPML TDLLGGQVDA AMDAAATSWP QVQSGKLRAL GVSTAQRVFF APELPPIAES VKGFEMNPWH GVMAPAGTPP AIVDKLAAEI QAFLRLPDTE AKLRERGVVR VGSSPAEFAK SLRDEAAFYK KLAADAGIKA E
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