Gene Vapar_6014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_6014 
Symbol 
ID7975299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand- 
Start bp737717 
End bp738367 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content65% 
IMG OID644796575 
Producthypothetical protein 
Protein accessionYP_002947849 
Protein GI239820664 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.427837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCCG CAGATTTTCT TTTTGCCCCT GAGGTGCAAA AGCTCTTGAA GGTCGTCTAT 
GCGGCTCCCG ACCAACCGTT TGCAGCAAGC GAGCTTGCCC GGCGCTCGAA GCTCGATCCC 
GCCGATGTGG CGCGCACGCT GGAGCACCTT GTCGGCAGCG GCATCCTGAA GAGGCAAAAG 
CCGAAGGCGG ACGAGCCCGA CACCGTGACG CTCGACCGTT CGTTCGTCTT CCACGAGGAA 
CTGCGCAGCA TCGCGCTGAA GTCGTTCGCC GCCGCGGAAC CGCTTCGCTC GATGCTGCGC 
AGCAAGTTCA AGGACTCGGT CTTGCGTGCC TTCCTGCTGG GAGAGGACAA GGACGGCACC 
CTGGAGCTCC TGGTCGTGCA CGGCCAGTCC ATACCCGATG AAGGGGCCAT GGCAGCCGCC 
TGCCAGAAGC TGTCGAAGAC CATCCACCGC CACCTGAAGG TGCATGTCAT TTCGAACGCC 
AGGTTCAACG GCCTGGCGGT GCGCGACCCG CTCGCATCCA AGCTGGCAGC GGCCTGCGCG 
CTCGAGATCG TCGCGCTCGG GGACACCAAG GCCCAGCCGC CCGCCGAGCG GATCGGGCTC 
CTGCAAAGCG CGAAGAAGAA ACTGGCAACG CTGTCGCGGC CGTCCTCCTG A
 
Protein sequence
MSAADFLFAP EVQKLLKVVY AAPDQPFAAS ELARRSKLDP ADVARTLEHL VGSGILKRQK 
PKADEPDTVT LDRSFVFHEE LRSIALKSFA AAEPLRSMLR SKFKDSVLRA FLLGEDKDGT 
LELLVVHGQS IPDEGAMAAA CQKLSKTIHR HLKVHVISNA RFNGLAVRDP LASKLAAACA 
LEIVALGDTK AQPPAERIGL LQSAKKKLAT LSRPSS