Gene Vapar_6000 details

Gene Information

• Locus tag: Vapar_6000
• ID: 7975285
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012792
• Strand: -
• Start bp: 723642
• End bp: 724427
• Gene Length: 786 bp
• Protein Length: 261 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 644796562
• Product: hypothetical protein
• Protein accession: YP_002947836
• Protein GI: 239820651

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACGAAG TCGATATCGC CGCATGGGTG ACGAATGCGC CCAATGGCCA GCAGGGTTTC 
CGCGAGGCCG TCCATACGAT CTTGGACAGC ATTGGCCATT CTCAGAACCT GCAGGCCAAG 
ATGGTCATGA AAGGCGGCTT GTTGCTGGCC ATTCGTTATG ACAGCTCGCG ATATACGCGG 
GACCTGGATT TTTCCACAAG CGACAAGTAC GCGCCCGAGA GTGTGGAGGC CGTTCTGTCG 
GAGATTCGCG AAGGCTTGCT CGCGGCAGAG GAGAGGCTGC CTTACAGTAC GGCGTGCCGC 
TTACAGTCAC ACAGGCTCGA GCCCAAAGGG GAGAATCGCA CCCACCACAA CCTGGCGTTG 
AAGATCGGAT TCGCAGACAA AACCAATGCG ACCGCCATGG CCCGGCTGAA CGCCGGCAAA 
TCCGCCCAAG TGGTCGAGAT CGACTACAGC TTCAACGAGG CCGTCTTCGA CGTGGAGATG 
TTGGAGCTGG ATGGGGGAGC CACCATTCGC TCGTACACGC TACACAATGT GCTGGCTGAA 
AAGATGCGCT CCTTGCTTCA GCAGCCGATC CGAAGGCGAA ACCGGCGCCA GGACGTCTAT 
GACATCTGGT TGTTGTTGGA ATCGGGCGAG GCGATCTCTT CCGCGGATCT GAGCAAGATC 
CACAACATCT TGTTGGCTTC CTGTGCCTCC AAGGGCGTCA TTCCTGACGC AAGGGCCATG 
GAGGCTGTCC AAGTGATGGA AATGGCTCGG AAGGGCTACG AAGATCTGCG GTCCGATGTA 
AGGTGA 

 

Protein sequence

MNEVDIAAWV TNAPNGQQGF REAVHTILDS IGHSQNLQAK MVMKGGLLLA IRYDSSRYTR 
DLDFSTSDKY APESVEAVLS EIREGLLAAE ERLPYSTACR LQSHRLEPKG ENRTHHNLAL 
KIGFADKTNA TAMARLNAGK SAQVVEIDYS FNEAVFDVEM LELDGGATIR SYTLHNVLAE 
KMRSLLQQPI RRRNRRQDVY DIWLLLESGE AISSADLSKI HNILLASCAS KGVIPDARAM 
EAVQVMEMAR KGYEDLRSDV R