| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5994 |
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| Symbol | |
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| ID | 7975279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 717576 |
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| End bp | 718283 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796556 |
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| Product | putative transcriptional regulator, Crp/Fnr family |
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| Protein accession | YP_002947830 |
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| Protein GI | 239820645 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACATCAG CCCCGCCCCG CACCGTCCTC AACCGCCTGC TCGAGGCGCT GCCGCCCGCG
GACCGGGTGC ATCTGCTCGA GCGCTGCGAC AGCGTGCAGT TGGTCACGGC GCAGATCCTC
TACGAGCCGG GCGATGTCAT TCATCACATC CATTTCCCCA CGAGCGCGTT CGTCTCGCTG
GTGTCGACCG CGGACGGCCA CGATGGCCTC CAGACGGGGA TGGTGGGCAA CGAGGGGGCC
CTGGGCTACG AGCTGTCGCT GGACGTGCAG CGCGCGCCGC TGCGGGCACT GGTGCAGGGG
GGCGGCATGG CCTGGCGTCT GACGGCACAA TCGTTCGCCC AGGAGCTGGA GCAGAACTCG
AAGCTCAAGC GCATCCTCAA TCGCTACGTC TGCGTGCTCT TGATGGAATT CGGCCGCTCG
GGCCTGTGCA ACCGCTTCCA CTTGATCGAG GAGCGGCTGG CGCGCTGGCT GCTGACTACA
CAGGACTGCG CGCATTCGAC GCACCTCGCG CTGACCCATG AAGTGCTGGG CCGCATGCTG
GGCGTGCGCC GGGTCGGCAT CACCAATGCG GCAACGGCGC TGCACAGGCG CCGGTTGATT
GACTATCGAC GGGGCGTCAT CACGATCACG GACCGCGAAG GGCTGGAGAA CGCGGCGTGC
GATTGTTACC GGGCCAATCG GCGCAGTTAT GCGCACCTGA TCGCATAG
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| Protein sequence | MTSAPPRTVL NRLLEALPPA DRVHLLERCD SVQLVTAQIL YEPGDVIHHI HFPTSAFVSL
VSTADGHDGL QTGMVGNEGA LGYELSLDVQ RAPLRALVQG GGMAWRLTAQ SFAQELEQNS
KLKRILNRYV CVLLMEFGRS GLCNRFHLIE ERLARWLLTT QDCAHSTHLA LTHEVLGRML
GVRRVGITNA ATALHRRRLI DYRRGVITIT DREGLENAAC DCYRANRRSY AHLIA
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